Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000093g0060 ATGCCATCCCGGCCCCCCTCCGAGGTGGTTGCCGTCGACCCATATCCACCTTGTTCCCTCTTCTTTCTCTCTTTCCTTTGTTTTCGCAGACGCAGCAGAAAACGCACCACCCCTTCTGAAGATTCCGAGTCAGAGCCTCCTCATCGCTTCTCCTACTCCTCCCTCCGACTCGCCACCACCACCTTCTCGACCCGCATAGGCCAAGGCGGGTTCGGACCTGTCTTCTCCGGCGTTCTGCCTTCGACCCGTAAGCCCATCGCCGTCAAGCTCATGGACTCTGCCTCTCTCCAAGGCGAGCGTGAGTTTCACAACGAGCTCTTCTTCGCTTCCAAGATTTGTTCCCAACACGTCGTCGTCGCGCTAGGCTCCGCCTTTGATGAGAATCGCCGGAGATTCTTGCTGGTGTACGATCTTATGCCCAACGGAAATCTTCAGGATGCTCTGTTGCGACGGAAGATCCCTGAGCTGATGGATTGGAAGAAACGTTTCGCCATAATTATTGATATAGCTAAAGGAATCCGTTACCTTCATTCTTGCCACCCACCTGTAATTCACGGAGATATCAAGCCGAGTAATATTCTACTGGACTCTTCTTTCTCAGCAAAAGTTGCCGATTTCGGGCTCGCTCGGTTGAAATCGGAATACCAGTACGATTTCGAGATTTCCGGTGGAATAGATTATTCTGGGTCAGTGGTGGAGGAAACAGAGAGCGTAAATACTGGTTTCGAGGAGCAAACAGTATCCATGCCAGAAACATCGCCGGAGACAGACTTCCCGGCCAAGGAAAACTGCGACGGGGGTAAGAAGAACGTTGAAAGGTTAAAGAGCAGATCAATGAAGGATTGGTGGAGGAAGGAAGACGATGACAATAAGAAAAAGAGCAAGAAGCAATTCGAATGGTGGAAAGAGGAGTACCGTGGGAAGCTGGAAAAGAAGAACAAGAAAAAGGTATTCTACAGTGATGAAGAAGCATTTGACATAGAGAGAACGAAGAACAAAAGAAGATCTAGGAGTATCGATTGGTGGTTCGACGGAATTAGCAGGATCAGCCATGATTCTTTCAGCGGAGAAATTCACAATCCCAAGAGCGGTGGAATCAGCAAGCTTAACAGAGGGAATCTATTGTACTGGGCACGCCATTGCGCGCGAAACGGGAAGCTTGTAGAACTGGTGGATCAGGGTATGACGGGTATGAAGTTACCGGAGAGAGAGGAGGCTCTGCTCTGCATAAGGGTGGCTCTGCTGTGTCAGGTGAAGTCACCGTCTCGTCGTCCTTCAATGGAAGAGGTTGTGAGAATGCTCTCCGGAGAGATGGAGCCACCGCCATTGCCTATCGAGTATTCGTCTTCATCACCATCTCCATTTCCCTTCAAGTCTGGAAAAACTATTAGAGAAATTCTTGTACGGAACGATTTTTAA 1419 0.4954 MPSRPPSEVVAVDPYPPCSLFFLSFLCFRRRSRKRTTPSEDSESEPPHRFSYSSLRLATTTFSTRIGQGGFGPVFSGVLPSTRKPIAVKLMDSASLQGEREFHNELFFASKICSQHVVVALGSAFDENRRRFLLVYDLMPNGNLQDALLRRKIPELMDWKKRFAIIIDIAKGIRYLHSCHPPVIHGDIKPSNILLDSSFSAKVADFGLARLKSEYQYDFEISGGIDYSGSVVEETESVNTGFEEQTVSMPETSPETDFPAKENCDGGKKNVERLKSRSMKDWWRKEDDDNKKKSKKQFEWWKEEYRGKLEKKNKKKVFYSDEEAFDIERTKNKRRSRSIDWWFDGISRISHDSFSGEIHNPKSGGISKLNRGNLLYWARHCARNGKLVELVDQGMTGMKLPEREEALLCIRVALLCQVKSPSRRPSMEEVVRMLSGEMEPPPLPIEYSSSSPSPFPFKSGKTIREILVRNDF 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000093g0060 472 MobiDBLite consensus disorder prediction 239 267 - -
Lele2000093g0060 472 SUPERFAMILY Protein kinase-like (PK-like) 37 217 IPR011009 -
Lele2000093g0060 472 PANTHER OS07G0586332 PROTEIN 21 287 IPR044576 -
Lele2000093g0060 472 Gene3D Transferase(Phosphotransferase) domain 1 268 440 - -
Lele2000093g0060 472 Gene3D Transferase(Phosphotransferase) domain 1 139 264 - -
Lele2000093g0060 472 FunFam Os07g0541700 protein 139 221 - -
Lele2000093g0060 472 MobiDBLite consensus disorder prediction 239 253 - -
Lele2000093g0060 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Lele2000093g0060 472 SUPERFAMILY Protein kinase-like (PK-like) 368 454 IPR011009 -
Lele2000093g0060 472 ProSiteProfiles Protein kinase domain profile. 60 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000093g0060 472 Gene3D Phosphorylase Kinase; domain 1 47 137 - -
Lele2000093g0060 472 SMART serkin_6 60 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000093g0060 472 Pfam Protein tyrosine and serine/threonine kinase 62 216 IPR001245 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000093g0060 50 214 Receptor kinase-like Gene Family AT3G58690 45.349 4.38e-36 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lele2000093g0060 PK_Tyr_Ser-Thr 1.9e-25 CL0016