Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000093g0050 ATGGATTCTTCCCAATCACAAACCATGGAGGCTCCCACTCTCACCGGTTTGCTCAATCGAATCTCCGCAGAATTCCCCTCCCGTCGAGCCATATCCGTCTCCGGCAAGTTCGATCTCCCCTATTCTCATCTTATCGAACTCATCGAACGCGCCGCTTCTCGTTTAGTCTCCTCTGGAATCAACGCCGGAGATGTCGTCGCTCTTACCTTCCCCAATACCGTCGAGTTCATCATAATGTTTTTGGCCGTGATTCGTGCCCGAGCCACGGCTGCGCCGCTGAACGCCGCCTATACGGCCGAGGAGTTCGAGTTTTACTTATCCGACTCGGAGTCGAAGCTCTTACTGACGTCCCAAGAAGGAAATTCTCCGGCTCAAGCTGCGGCTTCGAAGCTTAATATCCCTCACGCGACGGCTTCGCTTTCCAAAGCCGATGACGCCGAGCTCAGTCTATCTCTGCCTCAGAACAATTTAAAATCGGACTCGACCGCCAACCTCGTTAACGACCCTTCCGATGTGGCCCTATTCCTCCATACCTCTGGCACGACAAGCCGGCCCAAAGGAGTGCCTCTAACTCAGCACAACTTAGCCGCTTCGGTTCAGAACATAAAATCCGTGTACAGACTCACTGAGTCCGACTCGACGGTGATCGTTCTGCCACTCTTTCATGTCCACGGCCTCATGGCGGGATTACTTAGTTCACTCATTTCCGGGGCCGCTGTGACGCTGCCAACGGCTGGCCGTTTCTCGGCTTCGACGTTTTGGGCAGACATGCTGAATTATAACGCGACGTGGTACACGGCGGTCCCGACCATACACCAGATCATACTCGATCGTCACTCGAGTAAACCCGAACCCCACCCGAAACTCCGGTTTATTCGTAGTTGCAGCGCGTCGCTCGCACCGATTATATTGGGTCGGCTGGAGGAGGCATTCGGAGCCCCAGTTCTGGAGGCCTATGCAATGACGGAAGCGTCCCATCTAATGTCATCAAACCCGTTGCCGGAGGACGGGCCACACAAGCCCGGGTCCGTCGGGAAACCAGTGGGTCAAGAAATGGCGATACTGAACGAGAAGGGAGAGATCCAGAAGGATGGAGTTGAAGGAGAAGTCTGTATCCGGGGACCGAATGTGACAAAAGGATACAAAAATAACCCGAGTGCTAATACGACAGCGTTTCAATTCGGATGGTTCCACACCGGTGATCTCGGGTTCTTTGATTCAGACGGGTATTTGCATCTGGTTGGACGAATTAAGGAGCTCATTAATCGTGGAGGGGAGAAAATATCGCCCATAGAAGTAGATGCTGTCTTGTTATCTCATCCGGACATTGCTCAGGCGGTTGCTTTTGGAGTCCCAGACGACAAATATGGCGAGGAGATAAATTGTGCAGTAATAGCAAGAGAAGGATCAGAAATTGACGAGGAAGAGGTGTTGAAGTTTTGCAAGAAGAATCTTGCATCCTTCAAAGGCCCCAAGAAGGTTTTCATCACTGATTCTTTGCCCAAGACTGCCACCGGCAAGATCCTCCGCCGTCTTGTTGCTGAACACTTCGTTTCTCAAAAGCGAGCTTCTGTTGTGTAA 1581 0.5212 MDSSQSQTMEAPTLTGLLNRISAEFPSRRAISVSGKFDLPYSHLIELIERAASRLVSSGINAGDVVALTFPNTVEFIIMFLAVIRARATAAPLNAAYTAEEFEFYLSDSESKLLLTSQEGNSPAQAAASKLNIPHATASLSKADDAELSLSLPQNNLKSDSTANLVNDPSDVALFLHTSGTTSRPKGVPLTQHNLAASVQNIKSVYRLTESDSTVIVLPLFHVHGLMAGLLSSLISGAAVTLPTAGRFSASTFWADMLNYNATWYTAVPTIHQIILDRHSSKPEPHPKLRFIRSCSASLAPIILGRLEEAFGAPVLEAYAMTEASHLMSSNPLPEDGPHKPGSVGKPVGQEMAILNEKGEIQKDGVEGEVCIRGPNVTKGYKNNPSANTTAFQFGWFHTGDLGFFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAVIAREGSEIDEEEVLKFCKKNLASFKGPKKVFITDSLPKTATGKILRRLVAEHFVSQKRASVV 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000093g0050 526 FunFam Peroxisomal-coenzyme A synthetase 13 416 - -
Lele2000093g0050 526 SUPERFAMILY Acetyl-CoA synthetase-like 12 519 - -
Lele2000093g0050 526 CDD FACL_fum10p_like 26 515 IPR045310 GO:0016874
Lele2000093g0050 526 ProSitePatterns Putative AMP-binding domain signature. 175 186 IPR020845 -
Lele2000093g0050 526 PANTHER ACYL-COA SYNTHETASE 12 520 - -
Lele2000093g0050 526 Gene3D - 13 416 IPR042099 -
Lele2000093g0050 526 FunFam 4-coumarate--CoA ligase 2 419 520 - -
Lele2000093g0050 526 Gene3D - 417 520 IPR045851 -
Lele2000093g0050 526 Pfam AMP-binding enzyme 22 423 IPR000873 -
Lele2000093g0050 526 Pfam AMP-binding enzyme C-terminal domain 432 507 IPR025110 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000093g0050 13 520 Monolignol Biosynthesis Gene Families AT4G05160 32.061 1.27e-62 212