Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000093g0039 ATGAAAGCAGAGGATGGAAATGACTCCTTAGATACCATAATCAGAAAGGCAATTGGCAGAGAACCTTTTCTTTCTTTTCCAAGGGCTAGTGAGAGTTCGGTCCAGTGGATACAATTACTTCATGCGTTAGATCAGCAAGAACTGCCTGGCTGGCCTTTGCTCTCTCCTCTGAAGGTTCAGTTGCAGAAGTGTGAAAAGTGTTCCCGAGAATTCTGCTCTTCAATTAATTACAGAAGACATATACGTGTTCACCATCGGCTGAAAAAGATTGATAAGGATTCTACAAAAAATAGAGATCTGCTAGGAGCTTATTGGGATAAGCTATCTGTAGAAGTGGCAAAAGAAGTTGTATCATTCAAGAATGCGATGCTGGAGGAAGTTCCAGGGTCTTCTGTTTTAAAAGCGCTGACGACTCTGGTTCAGAAACAAGGATTTTCTTCACTTCCACAGAATTATCTGAAGGCTGGTTCTGCCCTTTTGGATATTGTTCAAGCAAGATCTTCCATTCTTTCTATATCTTCCAATGAGTTCTTTGGTATCCTTGATAGTGCCAGTGAAAAAACATTTTTATGTGGGGCAGCAGTGTCAATGCAAAAATATATTTTTGATGGAGAACCGGGAAAGATTGGCCTTGAACCAAAAAACCTAGTTGCCTGTACTAGTTTCTTGCTAGAACAGAAATTGGTAATGGCGTGGCTTGCTGACAAGGAAGCTGAAGCATTAAGATGCCAGAAGCTGCTAGTGGAGGAGGAAGAAGCTGCTCAGAAAAGGCAAGCTGAGATTTTGGAGAGGAAACGCCAGAAAAAGCTTAGGCAAAAAGAACAAAAAGCAAAGGGGCAAAAGCTTGAGGATGAGGCAGAAATGAAAAAGAATGGCAGCAGTAGAGTAGCTGACAGTTCATTAGCAGAAGCGTCTTCAAACACACGTGACTTTGGAGAACATAATCTAAATACATTTGTAGGCCATGGTCCTTCACTACACATGCCCTTTCATTGCACAAACACTAATGAAGGTGTGGATGGGGGTTCTCTGTCAATTTTTGATTGTGGAACCGATGAAAACATTGAGCAAGAGACATCCCAAGGACGTGATTGTCAACAAGTGGTTCCTCAACCAAAATCACAATGGGCTGTAGCTAATGGTTTTCATGCAAATCATAACTCTCAAATTTCCAAGCCTGGAGTCATTCAAAGATACGGGAGTCACCGCGATCAAAATGCTGCTCCCATGCTTAATGGTAACAAAGTATGGAGTCGAAAGCCTAAGCAAAAAATTATTGGGGTACATTCAAAAGCCAAATTTGAAAAAGAACTAGATGAGGGTAAAAACCATGAAGTTTTAATAGGGTCTATATCTGTTACTCTTGAAAATTGCAGCCAATCGGAGGATAATCTATTGGCATCTGGGGAGGACTCCATGGTAGGGAATTTAACCAAGCATAATAATGCCCAGGAAAAGCCAGCCAAACCTGATTTTGTACAGGTCGGTAACAATCGGTTAATGGTTAAAGCTGTTAAGCTTTGGAAGCCGGTTTCTCATCATGGAACTAAATATTCATTACCACTTCACCGTGCTAGTCCAGAAGCTGATGCAACAGATGGAAAAAAAAATGACCAGAATTTGTCCGATCAAAATTCTTTAAGGCCGTGTGACTTAGGTAATAGGGATAGTAGTTTTGAAAATAATTCCTCCTATCTAGAGACTCAAGTGGGTTCAGGAAACTTGCGGTTTTCCAGTGAAGCTGCCAAAGCTTTTCTTGCAGAAAGATGGAAAAAAGCTATATCATCAAACCATTTGAAATTGATTCTTTCACCTGACTCTGAACCTCCTAGGTGCACGGAGGCACAAGATTCTGAACTAGTTGCATGTCAATCTTCAAATATTGACAAATGCCGCATTTTTGCAAGTGCAGAGACTCAGCTGCCTATAACCTTGTGTAAATCCAAAACCAGAATGAAGCCCGAAACGGGTGTAAAGATTAAGTACATTCCTAAACAAAGGACAGCCTAA 2010 0.4095 MKAEDGNDSLDTIIRKAIGREPFLSFPRASESSVQWIQLLHALDQQELPGWPLLSPLKVQLQKCEKCSREFCSSINYRRHIRVHHRLKKIDKDSTKNRDLLGAYWDKLSVEVAKEVVSFKNAMLEEVPGSSVLKALTTLVQKQGFSSLPQNYLKAGSALLDIVQARSSILSISSNEFFGILDSASEKTFLCGAAVSMQKYIFDGEPGKIGLEPKNLVACTSFLLEQKLVMAWLADKEAEALRCQKLLVEEEEAAQKRQAEILERKRQKKLRQKEQKAKGQKLEDEAEMKKNGSSRVADSSLAEASSNTRDFGEHNLNTFVGHGPSLHMPFHCTNTNEGVDGGSLSIFDCGTDENIEQETSQGRDCQQVVPQPKSQWAVANGFHANHNSQISKPGVIQRYGSHRDQNAAPMLNGNKVWSRKPKQKIIGVHSKAKFEKELDEGKNHEVLIGSISVTLENCSQSEDNLLASGEDSMVGNLTKHNNAQEKPAKPDFVQVGNNRLMVKAVKLWKPVSHHGTKYSLPLHRASPEADATDGKKNDQNLSDQNSLRPCDLGNRDSSFENNSSYLETQVGSGNLRFSSEAAKAFLAERWKKAISSNHLKLILSPDSEPPRCTEAQDSELVACQSSNIDKCRIFASAETQLPITLCKSKTRMKPETGVKIKYIPKQRTA 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000093g0039 669 MobiDBLite consensus disorder prediction 293 309 - -
Lele2000093g0039 669 MobiDBLite consensus disorder prediction 264 309 - -
Lele2000093g0039 669 MobiDBLite consensus disorder prediction 538 555 - -
Lele2000093g0039 669 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 668 - -
Lele2000093g0039 669 MobiDBLite consensus disorder prediction 516 555 - -
Lele2000093g0039 669 MobiDBLite consensus disorder prediction 276 292 - -
Lele2000093g0039 669 ProSiteProfiles Zinc finger C2H2 type domain profile. 62 89 IPR013087 -
Lele2000093g0039 669 MobiDBLite consensus disorder prediction 472 491 - -
Lele2000093g0039 669 Coils Coil 252 272 - -
Lele2000093g0039 669 ProSitePatterns Zinc finger C2H2 type domain signature. 64 85 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000093g0039 4 667 C2H2 Transcription Factor Family AT4G25610 42.066 3.29e-146 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele2000093g0039 None None None