Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000093g0023 ATGTTGAAGTTTCTGTCACCCTTTTGTCTTCTTCCTCCAATTCTTTATACTCGTTTTGAATCCCTCGGTTTCTTACTCTTCCATGTGTGCTCTTCTTGTTCTTCTTCTTACTTCAGAGTCCAAAACTTTCCTTCCATGGCGCCTCAAATGCTTGTTCTATCTTTATTTCTTCTCATTTTCCTTATCCCCACTTCGTTTTCTTTCACTCCTGTGGATAATTATCTACTCAACTGTGGATCACATGCCAATGCATCACTTTTCAACCGTATCTTCACGGGCGATTCCACGAAGCCTGGCTTGGCTTTTCTTGCGGTGGGTAAATCTATTACACTTGTAAACCAAAATTCACCTCCGAATTCTTCCACTCTGTATCACACGGCTAGAGTTTTCACGAGCTCGGGGAGCTACAGGTTCCATATGAAGAGTAACGGTACCCATTTGGTACGTTTTCATTTCTCGCCCTTTTTAGCTCAAGGTTTTGATTTAAAATCCGCCAAGTTTAGTGTTCTGGTTGGTGGGAATACGCTTCTGAAAGCGTTTCAGTTGCCTAATGGCACGTTGATTAAGGAGTATATATTGAAGACAGAATCAAATCTGCTCGAAATAGAGTTTGAACCTGTGGGTGATTCAGGTTTTGGGTTTGTCAATGCTTTGGAGGTATTTACAGCTCCTGTGGACTTCATTCTGGATTATGGAGCCAGGTTAGTGGGCTCTTCTGGAGTTGAAGAGTACAGGAACCTTTCATCTCAGGTTTTAGAGACAGTTTACAGAATTAATGTCGGTGGCTCGAAAATAACTCCTTTCAACGACACCCTCTGGAGGACTTGGATTCCTGATGATGATTATTTGGTGTTTAAGGAAGCAGCTAAGCGTGTTGCTAGCACTCATACACCAAATTATCAGAAGGAAGGTGCAAGCCCAGAGATCGCTCCTGATCCTGTTTATATGACTGCCCAGGAGATGAATCGGGAAAACTCAAGTCTGGCTTCCAGGTTCAATATAACTTGGAAATTTCAGGTGACTCCGGAGGGGGGTGGTGTTCGACACTTGGTTCGGTTGCATTTCTGTGATATTGTTAGCCCTGCATTGAACTTGCTGTACTTTGATGTGTATCTTAATGGCTACTCTGCATACAAGGATCTTGATCTGTCATCTCTTACCGTCCATGTTCTTGCATCTCCAATCTATGTGGATTTTGTTGTAGATTCAGATGATTCAGGTTTTATTGAAATAAGTGTTGGTCCTTCTGATCTAAATAGTTTGATGAGGATGAATGCCTTGTTGAATGGCGCAGAGATCATGAAGATGGTCACTGTTAGGGGTTCACTAGTTGTTCATAAAAGAAAAACATTATGGGTATTGGTGGGCTCTCTTGTTGGAGGAGTTGTACTACTTTTAGCAGTGGTTGGCCTTCTTGCTTTTATGTGCAGGAAGAGGAAACCTAAACAAAAACCAGCAGAGAGTGTTGGCTGGACACCGTTACGAATGTTTGGAGGGAGCTCACTTAGCCGACTGTCTGAAGCTCTTGCATCTCCTGGTTCTCATGGATATTTAGGCTTGAAAGTCCCTTTTGCTGATATACAAGCAGCAACAAACAATTTTGATAGAAATTTGATTATAGGTTCTGGTGGTTTTGGGATGGTTTACAAAGGGACACTCAGAGAAAATGTGAGGGTTGCGGTCAAGAGAGGAATGCCCGGGTCTAGACAGGGCCTTCCAGAATTCCAGACTGAAATAGCAATTCTATCCAAAATTCGCCATCGCCATCTTGTTTCACTTGTTGGTTTTTGTGAGGAAAATTCAGAGATGATACTTGTCTATGAGTATGTTGAAAAGGGTCCACTTAAAAAGCATTTGTATGGTTCAGGACTACCTCCTCTGTCTTGGAAGCAGCGTCTCGAAATATGCATTGGTGCGGCTAGAGGTCTTCACTATCTTCACACTGGTTTTGCACAAGGAATCATCCACCGTGACATTAAATCGACCAACATATTGCTTGATGAAAATTATGTGGCCAAGGTTGCTGATTTCGGTCTTTCAAGATCTGGTCCATGCCTCAATGAAACCCATGTGAGTACTGGTGTGAAAGGCAGTTTTGGTTATCTAGACCCTGAGTATTTCCGGAGGCAGCAGCTTACAGATAAATCGGATGTTTATTCGTTTGGGGTTGTGCTTTTTGAGGTTCTCTGCGCCAGACCTGCTGTTGATCCACAACTTGCTAGGGAACAGGTGAATTTAGCAGAATGGGCACTTGAATGGCAGAAGAAGGGCATGCTGGAGCATATTGTCGATCCCCACATTGCCGGGCAGGTCAAACCTGAATCCTTGAAGAAATTTGGTGAAACAGCCGAGAAATGTTTGGCTGATTATGGCGTTGACAGGCCAACTATGGGCGATGTATTATGGAATTTGGAATATGTACTTCAGATCCAAGAAAGTGGTCATTTAAGAGAACCAACAGCCAACTTTACAGCAACTGTTTTTACTGGAACTTCTTCTGACAACATAAGAACACAGGGATATCATGATAATTGTAATTCAGACATAAGTACAAGCGAAGTTTTCTCCCAACTAATGAACAATGAAGGAAGATAG 2595 0.4258 MLKFLSPFCLLPPILYTRFESLGFLLFHVCSSCSSSYFRVQNFPSMAPQMLVLSLFLLIFLIPTSFSFTPVDNYLLNCGSHANASLFNRIFTGDSTKPGLAFLAVGKSITLVNQNSPPNSSTLYHTARVFTSSGSYRFHMKSNGTHLVRFHFSPFLAQGFDLKSAKFSVLVGGNTLLKAFQLPNGTLIKEYILKTESNLLEIEFEPVGDSGFGFVNALEVFTAPVDFILDYGARLVGSSGVEEYRNLSSQVLETVYRINVGGSKITPFNDTLWRTWIPDDDYLVFKEAAKRVASTHTPNYQKEGASPEIAPDPVYMTAQEMNRENSSLASRFNITWKFQVTPEGGGVRHLVRLHFCDIVSPALNLLYFDVYLNGYSAYKDLDLSSLTVHVLASPIYVDFVVDSDDSGFIEISVGPSDLNSLMRMNALLNGAEIMKMVTVRGSLVVHKRKTLWVLVGSLVGGVVLLLAVVGLLAFMCRKRKPKQKPAESVGWTPLRMFGGSSLSRLSEALASPGSHGYLGLKVPFADIQAATNNFDRNLIIGSGGFGMVYKGTLRENVRVAVKRGMPGSRQGLPEFQTEIAILSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSGLPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCLNETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLAREQVNLAEWALEWQKKGMLEHIVDPHIAGQVKPESLKKFGETAEKCLADYGVDRPTMGDVLWNLEYVLQIQESGHLREPTANFTATVFTGTSSDNIRTQGYHDNCNSDISTSEVFSQLMNNEGR 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000093g0023 864 SMART serkin_6 534 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000093g0023 864 Gene3D Transferase(Phosphotransferase) domain 1 610 824 - -
Lele2000093g0023 864 FunFam receptor-like protein kinase FERONIA 501 609 - -
Lele2000093g0023 864 FunFam Receptor-like protein kinase FERONIA 251 438 - -
Lele2000093g0023 864 PANTHER OS07G0166700 PROTEIN 521 811 IPR045272 GO:0004714|GO:0006468
Lele2000093g0023 864 FunFam Putative receptor-like protein kinase 73 224 - -
Lele2000093g0023 864 Gene3D Phosphorylase Kinase; domain 1 507 609 - -
Lele2000093g0023 864 SUPERFAMILY Protein kinase-like (PK-like) 520 805 IPR011009 -
Lele2000093g0023 864 Pfam Protein tyrosine and serine/threonine kinase 539 733 IPR001245 GO:0004672|GO:0006468
Lele2000093g0023 864 FunFam Receptor-like protein kinase FERONIA 610 823 - -
Lele2000093g0023 864 CDD STKc_IRAK 540 805 - -
Lele2000093g0023 864 Pfam Malectin-like domain 76 436 IPR024788 -
Lele2000093g0023 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Lele2000093g0023 864 ProSitePatterns Protein kinases ATP-binding region signature. 540 562 IPR017441 GO:0005524
Lele2000093g0023 864 Gene3D - 73 226 - -
Lele2000093g0023 864 Gene3D - 251 438 - -
Lele2000093g0023 864 ProSiteProfiles Protein kinase domain profile. 534 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000093g0023 56 864 Receptor kinase-like Gene Family AT3G46290 49.286 0.0 752
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele2000093g0023 Malectin_like 1.7e-32 CL0202