Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000093g0022 ATGGATCCTAATGGTTGTGTGGATGATAAGAGTGAAAGTAGACTGTATATTGGGAACCTTGATCTTAGAATAACAGAAGCTGCTCTTATAAAGATGTTTTCTCCTTATGGGAAGATTGTATCCGAGGATTTCTTATGGCACACTCGTGGCCCAAAGCGTGGAGAGCCACGTGGGTTTGCTTTTATCCAGTATAGCTCGAAAGAGGAAGCAGAATTGGCCAAGGAGAAAATGCATGGGAAGATAGCCTGTGGCCGGCCACTGGTTGTTCGGCTTGCCAGCGAGAGGTGCCTGTTAGAAACAGCCAATAACTCATCAAAAGCCATGGGAGAAGGGCACAAGATACACCATACTGGTAATGGCATGGGACAGACAAGTCGGAGTGCAAAAATAGCTGCAATAAAGAACAAATTGAAATCAATAGAGGAGGAGAGCTCTAGGCCAAAGAAACAGAAGCAAAGTGATGATGTATCATGA 474 0.4451 MDPNGCVDDKSESRLYIGNLDLRITEAALIKMFSPYGKIVSEDFLWHTRGPKRGEPRGFAFIQYSSKEEAELAKEKMHGKIACGRPLVVRLASERCLLETANNSSKAMGEGHKIHHTGNGMGQTSRSAKIAAIKNKLKSIEEESSRPKKQKQSDDVS 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000093g0022 157 SMART rrm1_1 14 90 IPR000504 GO:0003723
Lele2000093g0022 157 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 15 87 IPR000504 GO:0003723
Lele2000093g0022 157 Gene3D - 7 155 IPR012677 -
Lele2000093g0022 157 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 13 94 IPR000504 GO:0003723
Lele2000093g0022 157 SUPERFAMILY RNA-binding domain, RBD 8 99 IPR035979 GO:0003676
Lele2000093g0022 157 MobiDBLite consensus disorder prediction 135 157 - -
Lele2000093g0022 157 MobiDBLite consensus disorder prediction 107 157 - -
Lele2000093g0022 157 CDD RRM_RBM18 14 93 IPR039157 -
Lele2000093g0022 157 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 9 96 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000093g0022 13 95 Eukaryotic Initiation Factors Gene Family AT1G71770 39.759 2.84e-12 61.6