Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000087g0154 ATGATCATCATCAAGCCCGTCTCTCCCTATGGATTCCTCCTCTGCTTCTCCCTTCTCTCCCCCCTACTCGTTGCTGCTCAGCCCCCATCCAATTCTAACCCAGATCAGACCCAACAGCTCAATAAGCTCACCCCTTCCATGGCCATCATCATCGTCATCTTGATCGCCGCTCTTTTCCTCATGGGCTTCTTCTCCATCTACATCCGCCACTGCTCCGATTCTCCCTCCGGCAGCGTTCGCCCCCTTGGCCTCCGTGCTTCCCTTGGTCGTTCCAGGCGTGCTCCTCGCGGTCTCGATCCTCTCGTCATCCAGACCTTTCCCACTCTCCAGTACTCTGAAGTTAAGGCTCACAAGATCGGCAAAGGCGCCCTCGAGTGTGCCGTCTGCTTGTCCGAGTTCGAAGACTCCGAAACACTGCGTTTGATCCCCAAGTGCGATCACGTCTTCCACCCCGATTGCATCGACGAGTGGTTGGCTTCTCATACCACCTGCCCCGTCTGCCGAACCGACCTTGTTCCTCAGCCTGACCAGTCATTCCGCGGAGTTCCAAACGTCAACCCCGACGCCGTCGACCTTGAAGCTCAAAACGAGGCTGCGGAACCCGAACCCGAGCAACGTCATACTGCGGAGGCTGATCCAGAACCGGTGGAGCCCGACGTTCTATGCCTCAATCACACCATGAAACGGAACCGTACGCGAGGGTCTCGATCGGGTCGGGCGCGAAGGTTTCCCCGGTCGCACTCGACTGGGCATTCGTTGGTGCAGCCGGGTGAAGACACTGAACGTTTCACTCTGAGATTGCCTGTGGAAGTAAGGAATCGGATATTGAACCGGGAATTGCAACGGGCGACAAGCTTGGTTGTCTTGCCCAGAGAAGGTAGTTCGAGACGAGGCTATCGATTTAGTGGTGATGGCAGTAGCAGAGGGAGGTTTTCGAGGCGGCTGGACCGCGGTATTAAATCGGACCGATGGGTTTTCACGATGGCGCCACCGTTCCTCGTAAGGGCGTCGTCTATCAGGTCCCCGAAAGTGGGAGGGAGCGCCGGTGAAGGAACCTCCGCTCAATTCATCGTGGCGCCGGCGGCGGATGCTGCCCGGCCTCCGGTTTAA 1110 0.5775 MIIIKPVSPYGFLLCFSLLSPLLVAAQPPSNSNPDQTQQLNKLTPSMAIIIVILIAALFLMGFFSIYIRHCSDSPSGSVRPLGLRASLGRSRRAPRGLDPLVIQTFPTLQYSEVKAHKIGKGALECAVCLSEFEDSETLRLIPKCDHVFHPDCIDEWLASHTTCPVCRTDLVPQPDQSFRGVPNVNPDAVDLEAQNEAAEPEPEQRHTAEADPEPVEPDVLCLNHTMKRNRTRGSRSGRARRFPRSHSTGHSLVQPGEDTERFTLRLPVEVRNRILNRELQRATSLVVLPREGSSRRGYRFSGDGSSRGRFSRRLDRGIKSDRWVFTMAPPFLVRASSIRSPKVGGSAGEGTSAQFIVAPAADAARPPV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000087g0154 369 MobiDBLite consensus disorder prediction 199 214 - -
Lele2000087g0154 369 FunFam E3 ubiquitin-protein ligase ATL6 86 174 - -
Lele2000087g0154 369 Pfam Ring finger domain 125 168 IPR001841 -
Lele2000087g0154 369 PANTHER RING FINGER DOMAIN-CONTAINING 28 177 - -
Lele2000087g0154 369 MobiDBLite consensus disorder prediction 230 246 - -
Lele2000087g0154 369 CDD RING-H2_EL5_like 125 168 - -
Lele2000087g0154 369 MobiDBLite consensus disorder prediction 196 216 - -
Lele2000087g0154 369 MobiDBLite consensus disorder prediction 230 256 - -
Lele2000087g0154 369 SMART ring_2 126 167 IPR001841 -
Lele2000087g0154 369 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 173 IPR013083 -
Lele2000087g0154 369 SUPERFAMILY RING/U-box 125 175 - -
Lele2000087g0154 369 ProSiteProfiles Zinc finger RING-type profile. 126 168 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000087g0154 7 354 Rapid Response to Elicitors AT3G05200 46.301 8.30e-91 276