Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000087g0135 ATGATGGTTGCCGTGGGCAAAGGTTTGATGGCAATGGGTAGCGGCGAGGATGATGGAAGAGGCAACGGTGTTCGGTGGCCGGAAAGGCCCGTTAGTGGCATCGGAGGAGGTCCTGTTCTGAAGGCCAGGACTAGCAGGGCTTGGATCGGTTCACTGCGAGTGGCTCTGAGGAAGAGCTGGGAGAAGATGGGCGCACCTAAGAAAAGTGGGGTTAAGGTTTCGGAGGAGGCCGAGGAATTGGCTCGCGTCCCTTTGCAAGCAATCCTCTTGGCTGATAGTTTTACTACCAAGTTCAGACCTATCACCCTTGAACGTCCCAAAGTTCTATTACCGCTTGTAAATGTTCCCATGATAAATTACACATTGGCGTGGCTTGAATCTGCTGGTGTCGAAGAGGTTTTTGTTTTCTGCTGTGCTCATGCTAAGCAAGTGACTTCCTATTTGAAGAAATCTGAGTGGCTCTCCCAACCAAATTTCACCGTCTCAATGATAGAGTCGCATCATACCGTTAGTGCTGGAGATGCTTTGCGCCTGATATATGAGCGCAATGTGATACATGGAGATTTTGTCCTGATCAGTGGAGATACGGTAAGCAACATGTCACTTACTCAGGCTCTTCAAGAGCACAAGGAAAGAAGAAAGAAAGATAACGATGCAATAATGACCATGGATTGTTATATTGATATCTGCTCACCGGAGATTATGGGATACAAGATATTTACTCATGAAATTCACTCAAGTTATGCTGCAAGGATCGATAATTTCCGCAGCTATGACACTGTCAGCAAGGATATCATTCATAGATGGACATATCCATTGGTGCCAGATGTGAAGTTTTTTGGCAATTCCGCTACTAAACTTGAACGACGGGGAATGTATCGTGCATCAGAAATATCACAATCACATTCAGCAGTTGTTGGCCCATTTACAGTCATAGGATTTGGCACCAAAATTGGGGATAACACTACAATGTCAGATTCGGTTATTGGAGAAGGATGTACAATTGGCTCAAATGTTCAGATAGAGGGATCCTATATATGGGACAATGTCACCATTGAAGATGGTTGTAAACTTAGGCATGCCATTGTATGTGATGGGGTGACTATCAAGTCAGGAGCTGTTCTGGAACCTGGCGTGGTTCTATCTTTCAAGGTTGTAATTGGGCCAGACTTTGTTGTTCCTTCATACTCAAAAGTATCTTTATTTCAGCAGCCAATTGAGGAAGATAGTGATGAAGAGCTGGAATATGCTGACAGTACTGGTGCAATGAATAGCTTAGTGGATAGTGCAGAGGCTGCATCGCAGGTATTGGAGACACAATCCTTTTCTGCATCAGAGTTAGGTGTGGGTGGGGCTGGTTATGTTTGGTCAAAATGTGATGGAGGCCATGAAGAAGAATGGAGGCATTCAGTGGCTCCTATTCCCGCAGATAAAATTTCTGAGGCAATGAAAATTTTGGAGGAAGATCTGGATTTGGCTCATGATGGCAGTATTCTTCCTCTTTCTGGAGAGCTGAAACCTGATTCTAATGAATCAGACATTGATGATTCCAGAGATGACTCATACTTTGAGAAAGAGGTCGAAGCAACTTTTCTCAGGGCTGTGCATGAGAACATAAAAGAAGACCATGTGATTTTAGAAGTAAACTCTCTCAAGTTGTCATACAATAAGTTAGCAGCTGATTGTGCTGGAGCTATTTTCCATGCCATGATGAAATACGCTTTGGAGATCCCCCATAATTCAGCTGGTAGCTTGGTTCAGAACGTTGACAGTATACTAACAACCTGGAGAAAACTTCTAACGTCCTACCTTGCTGACATTGATGAGCAGATTGAAGTGATACTGAAGTTTGAAGAAATGTGCCTGGAATCTGCTAAAGAGTATGCTCCATTTTTCACAAAGATTTTGAGTATTATGTATGACAAAGATATCATAGAAGAAGATGCCGTTTTAAGTTGGGAAGACGAGAAGAGAGAGGCAGACGAGACAGATAAAACTTTTGTTAAGCAGGCCCAGACATTTATTCAATGGTTAAGAGAGGCTCCTGAAGAAGACGATGATGAGGAATAG 2070 0.4343 MMVAVGKGLMAMGSGEDDGRGNGVRWPERPVSGIGGGPVLKARTSRAWIGSLRVALRKSWEKMGAPKKSGVKVSEEAEELARVPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLESAGVEEVFVFCCAHAKQVTSYLKKSEWLSQPNFTVSMIESHHTVSAGDALRLIYERNVIHGDFVLISGDTVSNMSLTQALQEHKERRKKDNDAIMTMDCYIDICSPEIMGYKIFTHEIHSSYAARIDNFRSYDTVSKDIIHRWTYPLVPDVKFFGNSATKLERRGMYRASEISQSHSAVVGPFTVIGFGTKIGDNTTMSDSVIGEGCTIGSNVQIEGSYIWDNVTIEDGCKLRHAIVCDGVTIKSGAVLEPGVVLSFKVVIGPDFVVPSYSKVSLFQQPIEEDSDEELEYADSTGAMNSLVDSAEAASQVLETQSFSASELGVGGAGYVWSKCDGGHEEEWRHSVAPIPADKISEAMKILEEDLDLAHDGSILPLSGELKPDSNESDIDDSRDDSYFEKEVEATFLRAVHENIKEDHVILEVNSLKLSYNKLAADCAGAIFHAMMKYALEIPHNSAGSLVQNVDSILTTWRKLLTSYLADIDEQIEVILKFEEMCLESAKEYAPFFTKILSIMYDKDIIEEDAVLSWEDEKREADETDKTFVKQAQTFIQWLREAPEEDDDEE 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000087g0135 689 CDD LbH_eIF2B_epsilon 311 389 - -
Lele2000087g0135 689 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 229 689 - -
Lele2000087g0135 689 FunFam Trimeric LpxA-like enzyme 286 419 - -
Lele2000087g0135 689 ProSiteProfiles W2 domain profile. 517 688 IPR003307 GO:0005515
Lele2000087g0135 689 SUPERFAMILY ARM repeat 523 681 IPR016024 -
Lele2000087g0135 689 CDD eIF-2B_epsilon_N 85 223 IPR035543 -
Lele2000087g0135 689 Gene3D - 512 689 - -
Lele2000087g0135 689 Pfam eIF4-gamma/eIF5/eIF2-epsilon 609 688 IPR003307 GO:0005515
Lele2000087g0135 689 Pfam Nucleotidyl transferase 87 218 IPR005835 GO:0009058|GO:0016779
Lele2000087g0135 689 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 71 227 IPR029044 -
Lele2000087g0135 689 SMART 542_3 597 684 IPR003307 GO:0005515
Lele2000087g0135 689 FunFam Translation initiation factor eIF-2B epsilon subunit 513 689 - -
Lele2000087g0135 689 Gene3D Hexapeptide repeat proteins 289 419 - -
Lele2000087g0135 689 SUPERFAMILY Nucleotide-diphospho-sugar transferases 85 366 IPR029044 -
Lele2000087g0135 689 CDD W2_eIF2B_epsilon 523 681 IPR044123 GO:0005085|GO:0031369
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000087g0135 63 681 Eukaryotic Initiation Factors Gene Family AT4G18300 52.107 0.0 694