Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000087g0127 ATGAAGAACATTTTCAAGAAGCTTCACAAAGGGAGCAACCACGACCCTAATCGATCCAATGAAACACCGGCTTCCGTCGCATCACCTTCTGCTGCCTCAGATCTACGTACTGCACCCCTTCAAAGCTCTGCCCCCTCTCCGGCCAGTCCCTCTTCATTGTCTCCCTCCACGGCACCGGCTGGTGCTTCTCAACCCCAACCAGCTACGCCCAATCGACAGGACTATTTTTCGTCAGAGGAGGAATATCAGGTTCAGCTTGCCCTAGCCATCAGCGCTTCCAAGTCCGATTTTCGGGATGATCCTGAGAAGGATCAGATCCGAGCGGCAACACTGCTGAGCTTGGGAGGCCGTCGAATTGATTCAGCAAGGAATCATGATGAAGTGGCGAAGGCGCTGTCCCGACAGTACTGGGAATACAATGTGCTTGACTATGAGGAGAAAGTAGTTGATGGTTTTTATGATGTATATGGTCTTTCTACTGATTCATCAATGCAAGGAAAGATGCCCTCTCTGGAAGACCTTGAAGCAAATGCGGAAAATTCAAGTTTTGAAGTTGTCATAGTGAATCAAGCAATTGATCCTGCCCTGGAGGAGTTGGTGCAAATTGCACAATGTGTAGCATTAGATTGTCCTGTCACTGATGTTGGTATTTTGGTGCAAAGACTGGCTGAACTTGTTACAGGGCATATGGGTGGCCCTGTAAAGGATGCTAATATTATATTAGCAAGATGGACAGAACGAAGTACAGAGCTACGGACGTCTCTTCAGACAAGTATATTGCCTATAGGGTCCATAAATGTTGGCCTATCCAGGCATCGAGCTCTGCTTTTCAAGGTATTGTCTGACAACATCAAGATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTTATGGCTGCTCCTGGTACACTTATTCCAACTGATATTTTTAATTCTAAAGACCCTTCATTTAAGCCATACAATCCCAAGAATTTTCCAACTCTACAATCCACGAATGACAGTAGATTTTCTTACTCAAGGGCTATGCCATCTGATGGTGAAGGCAGTAGTCAAAGTTCTGCGATCAGAAATGATTCATTATCATCAAATGTAAGACCATATTTTGGGAAGTCTGATTATATGTCTTCAAACTTGAGTTCGAGTGGAGAAACTAGTGTTGGTCCTTCCAAGGTTCCTGGTAAAGCAACTTCTAGCCAACTGGACAATTTTCTTCCATCGGCCAGTAGTTCTCTTTACAAAGGAACTCGTGGGATGAATGCTATTGGTGATGGGACTAGACTGAATGTCAATGTTGTACCATATGGCCAGAATGGTCCAGATGACTCTAGGAACCTCTTTGCAGATCTTAACCCATTCCTGATAAAAGGAATGGGTAAGACTGGTGTACATAACAAACCTGTGGAAAATAAAGTTCCTGAACTTCATAGTACTAAAGAACACAGTTTTTCTGGTCGACCCCCGGTGCCTTTGATGTGGAAGAACCAGTATGCTTACAATGAAGTTCCCAGGAAACTTAACCGTAATCCCAATGAATATAACCCTTCTTCATTAGCTTCCAATAGTTCTTCTGTATCAGAAAAAAATGATGTCAATAATTCCAATTCATCATACTATGCAAATATTAATAAAGATAAAGATAGGAGCTCGATGCAAATTATTGGTACAGTATCAGCATCTGGTTCTGGCGATCTGAACAAGGTTGAAGATTTCAATGCTGGATGGAGCAAAGGGAATGTGGAAAAATCTCAAAACAACATAGTAGATGTTGTCAAAGAAACGGAAAACAATGAAATTGGATTTCATGACTGGAGAAAAAACACTCACGACAAATTCATGGGGAGCAATTTGAAACTAAAAGAGCCTGAGAGTACTAGTTCGTCAATTGATTCCATCACAAATAGGGTTGACCAAATCTTGGATGATGTAGATGTGGGTGAATGTGAAATTCCTTGGGAGGATCTGGTTCTTGGTGAAAGAATTGGTCTAGGTTCATATGGCGAGGTATATCAGGCTGACTGGAATGGCACAGAGGTTGCTGTGAAGAAGTTTTTAGATCAGGATTTTTCAGGTGCTGCCTTGGCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGACTGCGTCATCCTAATGTTGTTCTTTTTATGGGTGCTGTTACTCGACCTCCTAATCTCTCAATCATTACAGAGTTTCTTCCTAGGGGAAGCTTGTACCGAATTCTTCATCGTCCTAATTGTCAGATTGATGAGAAACCCAGAATTAAAATGGCTCTGGATGTGGCAAGGGGCATGAATTGCTTACACACCAGCACACCTACAATTGTTCACCGTGATCTGAAGTCACCAAATCTTTTGGTTGATAAGAACTGGAATGTTAAGGTTTGTGATTTTGGGTTATCACGACTAAAGCACAACACATTTTTATCATCCAAGTCAACTGCTGGAACGCCTGAATGGATGGCTCCTGAAGTTCTTCGCAATGAGCCCTCAAATGAGAAGTGTGATGTGTACAGTTTTGGAGTCATTCTATGGGAGCTTGCTACTCTAAAGTTGCCATGGAGTGGGATGAATCCCATGCAAGTTGTTGGTGCTGTAGGTTTCCAAAATCGTCGGTTAGATATCCCCAAAGAAGTTGATCCTTTAGTTGCAAGAATTATCTGGGAATGTTGGCAACAGGATCCCAATTCGCGACCCTCATTTGCACAGCTCACAGTAGCGCTAAAGCCCCTGCAGCGTCTAGTTATACCGTCTCATCAAGACCAGCCAGCTTCACCTTTGGCGCAGGAGATTTCTGTAAATTCTACCCCTTGA 2874 0.429 MKNIFKKLHKGSNHDPNRSNETPASVASPSAASDLRTAPLQSSAPSPASPSSLSPSTAPAGASQPQPATPNRQDYFSSEEEYQVQLALAISASKSDFRDDPEKDQIRAATLLSLGGRRIDSARNHDEVAKALSRQYWEYNVLDYEEKVVDGFYDVYGLSTDSSMQGKMPSLEDLEANAENSSFEVVIVNQAIDPALEELVQIAQCVALDCPVTDVGILVQRLAELVTGHMGGPVKDANIILARWTERSTELRTSLQTSILPIGSINVGLSRHRALLFKVLSDNIKMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPTDIFNSKDPSFKPYNPKNFPTLQSTNDSRFSYSRAMPSDGEGSSQSSAIRNDSLSSNVRPYFGKSDYMSSNLSSSGETSVGPSKVPGKATSSQLDNFLPSASSSLYKGTRGMNAIGDGTRLNVNVVPYGQNGPDDSRNLFADLNPFLIKGMGKTGVHNKPVENKVPELHSTKEHSFSGRPPVPLMWKNQYAYNEVPRKLNRNPNEYNPSSLASNSSSVSEKNDVNNSNSSYYANINKDKDRSSMQIIGTVSASGSGDLNKVEDFNAGWSKGNVEKSQNNIVDVVKETENNEIGFHDWRKNTHDKFMGSNLKLKEPESTSSSIDSITNRVDQILDDVDVGECEIPWEDLVLGERIGLGSYGEVYQADWNGTEVAVKKFLDQDFSGAALAEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIITEFLPRGSLYRILHRPNCQIDEKPRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWSGMNPMQVVGAVGFQNRRLDIPKEVDPLVARIIWECWQQDPNSRPSFAQLTVALKPLQRLVIPSHQDQPASPLAQEISVNSTP 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000087g0127 957 Gene3D Transferase(Phosphotransferase) domain 1 755 937 - -
Lele2000087g0127 957 Pfam Ethylene-responsive protein kinase Le-CTR1 129 327 - -
Lele2000087g0127 957 MobiDBLite consensus disorder prediction 400 425 - -
Lele2000087g0127 957 MobiDBLite consensus disorder prediction 342 380 - -
Lele2000087g0127 957 ProSitePatterns Protein kinases ATP-binding region signature. 682 704 IPR017441 GO:0005524
Lele2000087g0127 957 SUPERFAMILY Protein kinase-like (PK-like) 666 946 IPR011009 -
Lele2000087g0127 957 MobiDBLite consensus disorder prediction 344 380 - -
Lele2000087g0127 957 FunFam Serine/threonine-protein kinase isoform 1 667 754 - -
Lele2000087g0127 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Lele2000087g0127 957 SMART serkin_6 676 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000087g0127 957 PRINTS Tyrosine kinase catalytic domain signature 750 763 IPR001245 GO:0004672|GO:0006468
Lele2000087g0127 957 PRINTS Tyrosine kinase catalytic domain signature 836 846 IPR001245 GO:0004672|GO:0006468
Lele2000087g0127 957 PRINTS Tyrosine kinase catalytic domain signature 855 877 IPR001245 GO:0004672|GO:0006468
Lele2000087g0127 957 PRINTS Tyrosine kinase catalytic domain signature 789 807 IPR001245 GO:0004672|GO:0006468
Lele2000087g0127 957 PRINTS Tyrosine kinase catalytic domain signature 899 921 IPR001245 GO:0004672|GO:0006468
Lele2000087g0127 957 MobiDBLite consensus disorder prediction 17 77 - -
Lele2000087g0127 957 CDD STKc_MAP3K-like 682 925 - -
Lele2000087g0127 957 FunFam PAS domain-containing protein tyrosine kinase family protein 754 944 - -
Lele2000087g0127 957 MobiDBLite consensus disorder prediction 528 557 - -
Lele2000087g0127 957 ProSiteProfiles Protein kinase domain profile. 676 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000087g0127 957 MobiDBLite consensus disorder prediction 1 77 - -
Lele2000087g0127 957 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 78 932 - -
Lele2000087g0127 957 Pfam Protein tyrosine and serine/threonine kinase 677 926 IPR001245 GO:0004672|GO:0006468
Lele2000087g0127 957 MobiDBLite consensus disorder prediction 526 557 - -
Lele2000087g0127 957 Gene3D Phosphorylase Kinase; domain 1 669 753 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000087g0127 1 912 MAP Kinase Kinase Kinase AT1G08720 57.700 0.0 980
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele2000087g0127 PK_Tyr_Ser-Thr 9.4e-64 CL0016