Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000087g0119 ATGGCATTGGCATCCGATCAACACGACACCGTTTTCCCCGAAGTGGACCTTGACGACGATGACGACGAATCTCAAGAGGATGAAGACGACGACGACGACGACGTCCTTGGTGAGCCAGAGGACGATGAAGATCGCGATGCTTCTCCTTCCACCTCTTCTGCCCTCGCCGTTACCGTCCCCGACCCTTCCTCCACCGTCACCGTCGCCGTCCCCGGTTCTGCTGTCTCCAATGGCGTTCCTGCCCCAATTTCCACCTCTGCCGCTACCACAATTGTCGTCCCCGAGTCCGTCGATCCCAAGCGTCAGCGAATTGACTCCATCGAAGAGAAAAGGCCTCTGGACGATTCACGTAGACTTTTTCAACGCCTTTGGACCGATGAGGACGAGATCGAGCTCCTGCAGGGCTTCCTTGACTACACCACACAGCGTGGATCCTCCCACCATAATGACACCGCTCTGTTTTACGATCAAATCAAGTCCAAGCTTCAGCTCGACTTCAACAAAAACCAGCTTGTTGAGAAGCTCCGAAGGTTGAAGAAGAAATACCGCAATGTTTTGAATAAGGTTAGCGCCGGCAAGGAATTGTCCTTCAAGAGCCCCCACGATCAGGCCACCTTCGAAATTTCTCGTAAGATCTGGAGCAATTTGGGTTCAACCAGCGCTGCTGCCGAAGATACCGCGTTGGATGACGACGAAATCAGCCCCAACCCTAACCCTAACCCTAATTTTAGCCACTCACAGATCAAGAATGAGGTAACAATCGGGATTCCCGCGGAGAAGAGAACGCCATCGTCCCGGAAGCGTTCACGGTCTCGATCCGGGATCAGAACCGATGAGAAGCGCGACTTGAATGATGGATTGGCGTCAAACAAAGATAATTATTGTATTAGTAATAACAATGCTAATACTAATAATAATTATTATAGCAATAACCATAACATACCGGGCTTGATTGAGGAGACGGTGAGGAGTTGTTTGTCGCCCCTGTTCAAGGAGATACTGAGTAGTACCATGGGTAGCCCATTTGGGGCCAGGGGGTTGGGAGGATTGGCATTAAATCCTATGCCATTGAGCTTCGGTGTGCCATCCTTGATGAATTACGGCAGCGGGGAAACGGTAGATGAGAAGTGGAGGAAGCAACAAATTCTGGAATTGGAGGTGTACTCGAAGCGGCTGGAGTTGGTGCAGGATCAGATCAAGACTGCGTTGGAGGAGTTGCGATCCACTGGGCGATGA 1236 0.5121 MALASDQHDTVFPEVDLDDDDDESQEDEDDDDDDVLGEPEDDEDRDASPSTSSALAVTVPDPSSTVTVAVPGSAVSNGVPAPISTSAATTIVVPESVDPKRQRIDSIEEKRPLDDSRRLFQRLWTDEDEIELLQGFLDYTTQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLNKVSAGKELSFKSPHDQATFEISRKIWSNLGSTSAAAEDTALDDDEISPNPNPNPNFSHSQIKNEVTIGIPAEKRTPSSRKRSRSRSGIRTDEKRDLNDGLASNKDNYCISNNNANTNNNYYSNNHNIPGLIEETVRSCLSPLFKEILSSTMGSPFGARGLGGLALNPMPLSFGVPSLMNYGSGETVDEKWRKQQILELEVYSKRLELVQDQIKTALEELRSTGR 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000087g0119 411 Pfam Protein of unknown function, DUF573 120 214 IPR007592 GO:0006355
Lele2000087g0119 411 MobiDBLite consensus disorder prediction 13 45 - -
Lele2000087g0119 411 Coils Coil 385 405 - -
Lele2000087g0119 411 MobiDBLite consensus disorder prediction 233 251 - -
Lele2000087g0119 411 Coils Coil 168 188 - -
Lele2000087g0119 411 MobiDBLite consensus disorder prediction 1 64 - -
Lele2000087g0119 411 MobiDBLite consensus disorder prediction 49 64 - -
Lele2000087g0119 411 PANTHER BNAANNG10740D PROTEIN-RELATED 19 405 IPR007592 GO:0006355
Lele2000087g0119 411 MobiDBLite consensus disorder prediction 229 293 - -
Lele2000087g0119 411 MobiDBLite consensus disorder prediction 271 287 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000087g0119 3 408 GeBP Transcription Factor Family AT5G28040 46.067 5.93e-97 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lele2000087g0119 DUF573 9.4e-35 CL0123