Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000087g0108 ATGGAGCAGTATGAAATACTCGAGCAAATTGGAAAAGGGGCTTTTGGTTCTGCTCTTCTTGTGAGGCATAAGCACGAGAAGAAGAAATATGTTCTGAAGAAGATCCGACTGGCCCGCCAAACTGAGCGGTCTCGTAGATCTGCGCACCAGGAGATGGAGCTAATCTCTAAATTCAGAAATCCATTTATTGTGGAGCATAAAGATTCATGGGTAGAGAAGGGTTGCTATGTGTGTATTATTATAGGTTACTGTGAGGGTGGAGATATGGCGGAAGCTATAAAAAAGGCTAATGGCATTCTTTTTCCAGAGGAGAAACTTTGCAAGTGGCTTGTTCAACTTCTTATGGCACTTGACTACTTGCACACGAACCATATTCTTCATCGGGATGTCAAGCTGTATACTAATGAAAAAAAATCACATGATACTGATCAGTGTTCAAATATATTCTTGACGAAAGATCGAGACATACGCCTTGAACTTAATGATGAAGCAGGTGATTTTGGACTTGCCAAAATGTTGACTTCAGATGATCTTGCTTCTTCTGTTGTGGGAACACCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATTCCTTATGGTTCTAAATCAGATATTTGGTCTTTGGGAAACTCTGTGCATCATGTCTCCTTGGCTTTGTCATTTATCAACTGTATGCTGCTGGTTGATGCTCTATTCACTCGAGTAGTTGCAGACAGATTCAATCTGTTACACGGAACTATTTTTTCATTTGAAGTGTCTTTGTGGTGGCAGGCCGCGGAGCTACTTGGGCACCCTCATCTTCAGCCTTATGTTCTCAAGATCCATCTTAAAATCAATAACCCCAGACGAAGTACACTCCCAGCCAATTGGCCAGACTCCAAATACATGAAGAAGACTAGATTTGTGGAGCCAGGAGATTATCCTACTTCCACCTACAGGGATAAGCGGAATTCTTTTAAAAATGACCGGAATTTGAACCCTAGCGTATCTGGAGCTGAGCAAGATTCTGTATGCTCTACCCTAGAAATAGATTGTACTCCAGATCATTTGAATCACCGGTTAGCAGAACTGTGCATTGGGGATGGCCCTGAAGCGAACAAAATCCGTAAGCCAGGTGTTCGCAGGAATTCCAGAACTCCAAGATTGACATCATCAAAACCTTTTGCCACCCCTAAGAAACAAATGGAGTTTTCAAAGAATCGTGAGCTGGGTTCCTCAGTTTCCCCACCTTGTGGTGATCGTTCAATCATGAAAGATAAGTGCACTGTTCACGTATCTGATAGAGCTGCCGTCAGGCCTAGTTTGACGGATGCTTCGAGGAGAACCAAATGCAACACGTATCAGGAAAATGATGAGGAGAAAAGTGGGTCCTCTGATCAAAATGTAACTGCCGGCGCATCAAGCCATGCCTCTTTCGACTGGCATGGCCGGCATTTTGACACTTCATCATACCAACAAAGAGCTGAAGCTTTAGAAGGGTTGCTCGAATTTAGTTCAAGGTTGCTACAACAGGAAAGGTATGACGAACTCGGGGTCTTGCTGAAACCCTTTGGACCTGGGAAGGTATCTCCTCGTGAAACTGCTATCTGGTTGAGTAAAAGCTTCAAAGAAAACACACAACCGTGA 1626 0.436 MEQYEILEQIGKGAFGSALLVRHKHEKKKYVLKKIRLARQTERSRRSAHQEMELISKFRNPFIVEHKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGILFPEEKLCKWLVQLLMALDYLHTNHILHRDVKLYTNEKKSHDTDQCSNIFLTKDRDIRLELNDEAGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGNSVHHVSLALSFINCMLLVDALFTRVVADRFNLLHGTIFSFEVSLWWQAAELLGHPHLQPYVLKIHLKINNPRRSTLPANWPDSKYMKKTRFVEPGDYPTSTYRDKRNSFKNDRNLNPSVSGAEQDSVCSTLEIDCTPDHLNHRLAELCIGDGPEANKIRKPGVRRNSRTPRLTSSKPFATPKKQMEFSKNRELGSSVSPPCGDRSIMKDKCTVHVSDRAAVRPSLTDASRRTKCNTYQENDEEKSGSSDQNVTAGASSHASFDWHGRHFDTSSYQQRAEALEGLLEFSSRLLQQERYDELGVLLKPFGPGKVSPRETAIWLSKSFKENTQP 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000087g0108 541 Gene3D Transferase(Phosphotransferase) domain 1 84 242 - -
Lele2000087g0108 541 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 496 - -
Lele2000087g0108 541 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele2000087g0108 541 MobiDBLite consensus disorder prediction 312 331 - -
Lele2000087g0108 541 ProSiteProfiles Protein kinase domain profile. 4 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000087g0108 541 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Lele2000087g0108 541 MobiDBLite consensus disorder prediction 377 391 - -
Lele2000087g0108 541 Pfam Protein kinase domain 4 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000087g0108 541 MobiDBLite consensus disorder prediction 432 469 - -
Lele2000087g0108 541 SUPERFAMILY Protein kinase-like (PK-like) 1 313 IPR011009 -
Lele2000087g0108 541 MobiDBLite consensus disorder prediction 362 411 - -
Lele2000087g0108 541 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000087g0108 1 209 MAP Kinase Kinase Gene Family AT4G26070 33.175 2.93e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Lele2000087g0108 Pkinase 1.7e-40 CL0016