Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000087g0093 ATGATTAATTTCGAAGAGACCGAGTTACGACTCGGATTGCCCGGTGCTCTGTCCGCTGCCGCCACCGACGCCGAGTCTTCCCTCAAGACCGCCTGGTCTACCGGTGGCAAGAGAGGCTTCTCCGACACCGCCGTGGATTGGAAGCTCAATCTATCTCCCCACAGTACTGCCCAGTCAACCCGCGAGCCGACCGACAGCACAACTGCCGCTTCTCCCTCTAACGGTCCCGCGAAGCCACCCGCCAAGGCACAAGTAGTGGGTTGGCCACCGGTGCGATCATCGAGGAAGAACATCGGGATATCGCAGAACCAGAAGAAAAACAAGGAAGAAGGTGCGACGTTCGTGAAGGTGAGCATGGACGGTGCGCCTTATCTGCGCAAAGTGGACTTGAAACTGTACAGGAGCTACCAACAGCTGTCCGGGGCACTCGCTAAAATGTTCGGCTCCTTCACCAACGCCAATTATGGCTCTCCTCAGGCCACAAACGAGTTCCTCAACGAGAGCAAACTCATCGATCTCTTGAACGGCACCGACTACGTCCCCACTTACGAAGACAAGGACGGTGATTGGATGCTCGTCGGCGACGTCCCCTGGGAAATGTTCGTGGAATCCTGCAAACGCCTCCGCATCATGAAAGGATCTGACGCAATTGGGCTAGCGCCAAGGGCGGTGGAAAAGTGCAAGAACAGAAGCTGA 696 0.5632 MINFEETELRLGLPGALSAAATDAESSLKTAWSTGGKRGFSDTAVDWKLNLSPHSTAQSTREPTDSTTAASPSNGPAKPPAKAQVVGWPPVRSSRKNIGISQNQKKNKEEGATFVKVSMDGAPYLRKVDLKLYRSYQQLSGALAKMFGSFTNANYGSPQATNEFLNESKLIDLLNGTDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSDAIGLAPRAVEKCKNRS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000087g0093 231 ProSiteProfiles PB1 domain profile. 112 213 IPR000270 GO:0005515
Lele2000087g0093 231 Pfam AUX/IAA family 6 222 IPR033389 -
Lele2000087g0093 231 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 218 IPR003311 GO:0005634|GO:0006355
Lele2000087g0093 231 MobiDBLite consensus disorder prediction 53 107 - -
Lele2000087g0093 231 Gene3D - 94 225 - -
Lele2000087g0093 231 SUPERFAMILY CAD & PB1 domains 102 212 - -
Lele2000087g0093 231 MobiDBLite consensus disorder prediction 53 74 - -
Lele2000087g0093 231 FunFam Auxin-responsive protein 107 223 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000087g0093 113 216 B3 DNA Binding Superfamily AT5G20730 29.808 5.06e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele2000087g0093 AUX_IAA 3.3e-79 CL0072