Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000087g0088 ATGCATAGCAGGACGCGTGTGTTGCTCCTTGTTTGCATCTTTGGGTTCCTGAGAACCCGTGAAGCATGGGCCCAGGGCGCCGGAGAGCCGTTGATCCTGGGCTGTGGGCTGGCCGAGGGCGGCGGCAAGGATGCCGATGGAAGGCAATGGGAGGCCAATACTAAGTACTTGTCGGGAGGTAATTCCATAACTCTTAAAGCATCGTACCAAGACCCTTCGGTCATGTCTGAGATTCCATACATGTGGGCACGTGTTTTCACGTCATCAGAGGCAATGTATAAATTCCCAGTTCAACCGGACAGGCGTTATTGGCTTCGGCTCCACTTTTATCCCTCCGTTTATGGCTCCTATAATACGGCCAATTCATATTTCTCCGTGACGGCCAACGGGGTTACGCTTTTGAGCAACTTCAGCGCTTTTATTACTTGTCAGGCCTTGTCCCAAGCTTACATTATCAGAGAGTATTCCCTTGCCCCTTTGAATTCAAATACTCTCACGGTTACTTTTAAGCCATCAGACAAGTACGATCGAGCTTTCGCTTTTGTGAACGGGATCGAGGTGATTCAAATGCCAGATTTGTTTGGTTCAGCCACATTAGTTGGGTTTTCCGACCAAACCGTGGATGGAAAAAGCTTGAATTTCCAAACAATGTTCAGGCTCAATGTTGGTGGGCAATATATATCCCCACTCCAAGATTCTAATCTTACGAGGACATGGTACGATGACACGCCCTATTTATACGGTGCATCGGTCGGGGTCACTGATCAAGCTGCCCATAATGTCACTATCGACTTCCAAAGCATGCCACATTACGTTGCTCCTCCCAGTGTCTACTCTACATCAAGATCGATGGGAAACGATATGAACGTGAACATGGGATATAACCTCACTTGGACATTCCAAATTGATCCAAACTTCATGTACCTCGTGAGGTTTCACTTCTGTGACTTCTATTATAGTAGAGTGAACCAGATAGTTTTCGACATCTACGTGAACAATCAAACGGCACAGGCCGCGGCAGATGTAATAGCGTGGACAAGAGGAAAGGGGGTGCCGACGTACAAAGACTATGTGGTGATTGTGCAAGATGGGCAGGGCAACGAGCAATTATGGATTGCTCTGCATCCATCGTCCGGAACAAAGCCTGAGTACTATGATGCGATATTGAATGGGGTGGAGATATTCAAGATCAATGAAACAACCTTGGCTGGGCCAAATCCTCAGCCGTCAGATATGCTCGTAAAGAGCGAGCTGCAACAATCGCAGACTTTTAACACACCCAAGGGCAGTCACAAAAAAGCGTTGTTGCTAAGTGCCGGAGGAGCTGCGGGAGTTGCATTCTTAGCTGCAATATGCATTGTTGTGTACCAGAAGAAGAAGAGGGCGCCGGGATCAGATTCACACACATCATGGCTACCGATCTATGGGAATTCCCCTGGAAATAGCAGCAGATCCACGACGTCAGGGAAAAGCTACGCCGGCAGCAACATATCGGCCATGGCTCAAGGTCTTTGTCGCTATTTCTCCTTGCAAGAGATCAAGCAAGCGACCAAGAATTTTGACGAGTCTAATGTTATTGGGGTTGGAGGATTCGGGAAGGTTTATAAGGGTGTTATAGATAAGGGGAGGATGGAAGTGGCCATCAAGAGGTCGAATCCGCAGTCAGAACAGGGAGTGAATGAGTTCCAGACTGAGATTGAGATGCTTTCAAAACTAAGACACAAGCATTTGGTGTCCTTGATTGGGTTCTGCGAGGAGCAGAATGAGATGTGCCTGGTTTATGACTACATGGCACGTGGCACCCTAAGGGAGCATCTTTACAAGGGCAACAAACCTCTATCTACTTTGTCGTGGAAGCAAAGGTTGGAGATTTGCATTGGAGCTGCGAGGGGGCTTCACTACCTTCACACCGGGGCTAAATACACCATCATTCACAGAGATGTCAAGTCAACTAACATTCTATTGGATGAGAATTGGACTGCCAAGGTTTCAGATTTCGGGTTATCAAAAACTGGCCCGGACATGAAGAATGGGCATGTTAGTACGGTGGTAAAGGGCAGCTTCGGATATTTGGACCCTGAATATTTTAGGAGACAACAGTTGACCGAGAAGTCCGATGTGTATTCATTTGGGGTGGTCTTGTTTGAGGTTCTATGCGCAAGGCCCGTTTTGAATGCGAGCCTTCCAAGGGAACAGGTGTCTCTCTCGGATTGGGCTTTGAGCTGCAAGAGAAAAGGGGCATTGGAGGATATCATTGACCCAAATATGAAAGGGAAGATCAATCCAGAGAGTCTGAGCAAGTTCGCAGACACGGCTGAGAAGTGCTTGAGCGATCATGGGCTTGCCCGACCCTCGATGAATGATCTGTTGTGGAATCTAGAACTCGCTCTTAACCTCCAAGAAAACACAAATGGGTCGAATTACTCTTCAAAAGCGGAGGAAAGTGAGTTGGTAGACAACGACGTGGGAAACCATGATACCAGCCAAGATTCAGGTGATACTTCATCTGCCATCTTCTCACAAATCGTCAATCCTATAGGCCGATGA 2547 0.4762 MHSRTRVLLLVCIFGFLRTREAWAQGAGEPLILGCGLAEGGGKDADGRQWEANTKYLSGGNSITLKASYQDPSVMSEIPYMWARVFTSSEAMYKFPVQPDRRYWLRLHFYPSVYGSYNTANSYFSVTANGVTLLSNFSAFITCQALSQAYIIREYSLAPLNSNTLTVTFKPSDKYDRAFAFVNGIEVIQMPDLFGSATLVGFSDQTVDGKSLNFQTMFRLNVGGQYISPLQDSNLTRTWYDDTPYLYGASVGVTDQAAHNVTIDFQSMPHYVAPPSVYSTSRSMGNDMNVNMGYNLTWTFQIDPNFMYLVRFHFCDFYYSRVNQIVFDIYVNNQTAQAAADVIAWTRGKGVPTYKDYVVIVQDGQGNEQLWIALHPSSGTKPEYYDAILNGVEIFKINETTLAGPNPQPSDMLVKSELQQSQTFNTPKGSHKKALLLSAGGAAGVAFLAAICIVVYQKKKRAPGSDSHTSWLPIYGNSPGNSSRSTTSGKSYAGSNISAMAQGLCRYFSLQEIKQATKNFDESNVIGVGGFGKVYKGVIDKGRMEVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEQNEMCLVYDYMARGTLREHLYKGNKPLSTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKSTNILLDENWTAKVSDFGLSKTGPDMKNGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVLNASLPREQVSLSDWALSCKRKGALEDIIDPNMKGKINPESLSKFADTAEKCLSDHGLARPSMNDLLWNLELALNLQENTNGSNYSSKAEESELVDNDVGNHDTSQDSGDTSSAIFSQIVNPIGR 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000087g0088 848 FunFam FERONIA receptor-like kinase 212 398 - -
Lele2000087g0088 848 FunFam FERONIA receptor-like kinase 30 191 - -
Lele2000087g0088 848 Gene3D - 212 399 - -
Lele2000087g0088 848 Gene3D - 35 191 - -
Lele2000087g0088 848 CDD STKc_IRAK 526 794 - -
Lele2000087g0088 848 FunFam Receptor-like protein kinase FERONIA 597 813 - -
Lele2000087g0088 848 Gene3D Transferase(Phosphotransferase) domain 1 597 821 - -
Lele2000087g0088 848 ProSiteProfiles Protein kinase domain profile. 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000087g0088 848 MobiDBLite consensus disorder prediction 470 490 - -
Lele2000087g0088 848 MobiDBLite consensus disorder prediction 805 836 - -
Lele2000087g0088 848 SMART serkin_6 520 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000087g0088 848 SUPERFAMILY Protein kinase-like (PK-like) 495 795 IPR011009 -
Lele2000087g0088 848 MobiDBLite consensus disorder prediction 463 490 - -
Lele2000087g0088 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Lele2000087g0088 848 ProSitePatterns Protein kinases ATP-binding region signature. 526 549 IPR017441 GO:0005524
Lele2000087g0088 848 Pfam Malectin-like domain 34 397 IPR024788 -
Lele2000087g0088 848 FunFam receptor-like protein kinase FERONIA 482 596 - -
Lele2000087g0088 848 Gene3D Phosphorylase Kinase; domain 1 481 596 - -
Lele2000087g0088 848 Pfam Protein tyrosine and serine/threonine kinase 524 789 IPR001245 GO:0004672|GO:0006468
Lele2000087g0088 848 PANTHER OS07G0166700 PROTEIN 504 800 IPR045272 GO:0004714|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000087g0088 29 848 Receptor kinase-like Gene Family AT3G51550 52.982 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele2000087g0088 Malectin_like 4.7e-38 CL0202