Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele2000087g0078 | ATGATGATTCCGCATCTGAATCTGCAGGGAACTCCAGTGAATATCATTGTAGGTTCTCATGTCTGGATTGAAGATCCAGATGTTGCTTGGATTGATGGACAGGTATCAAAAATCAATGGAAAGGATGCTGAAATTGAAACTACCAATGGAAAGAAGGTTTCTGCAAAATTATCAAAAATATATCCCAAAGATATGGAAGCTCCTGCCGGTGGAGTGGATGATATGACAAAGCTGTCTTATTTGCATGAGCCTGGAGTCCTGCAGAACCTAAAATCTAGATATGAATTGAATGAAATATATACTTATACGGGAAATATTCTTATTGCCATAAATCCATTCCAAAGACTACCCCATCTTTATGATCCTCACATGATGCAACAGTACAAGGGAGCACCATTCGGAGAACTAAGTCCTCATGTATTTGCAGTAGCTGATGTTGCATATAGGGCAATGATTAATGAAGGAAAAAGCAATTCGATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGCGATATTTAGCTTTCTTAGGTGGTAGGGCTGCTACTGAAGGACGAACAGTCGAACAACAAGTCCTTGAATCAAATCCAGTTCTTGAAGCCTTTGGCAATGCAAAAACTGTCAGGAATAACAATTCGAGCCGTTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGTGGAAGAATCTCAGGAGCAGCAATTCGAACTTACCTTCTGGAGAGGTCTCGGGTCTGCCAAATTAATGATCCCGAACGCAACTACCACTGCTTTTATCTCCTTTGTGCTGCACCCCAGGAGGAAATTGAGAAATACAAATTAGATAATCCTAGATCATTTCACTACCTGAACCAATCAAATTTTTATGAACTGGCTGATGTAAGTGATGCTCGTGAGTATCTTGCCACCCGGAGAGCTATGGATGTTGTTGGAATAAGCCAAAAAGATCAGGAGGCAATTTTCCGCGTTGTTGCTGCAATTCTTCATCTTGGTAATATTGCTTTTGCCAAAGGAAAGGAAGTTGACTCATCAGTTCCAAAAGATGACAAAGCGAAATTCCACTTGAAAACAACTGCAGAGCTCCTCATGTGTGATGCCGATGCCTTGCAAGATGCACTGTGCAAACGTGTCATGGTCACCCCCGAAGAAGTTATAAAGCGGAGCCTCGACCCTCAAAGTGCGTTAATCAGTAGAGATGGCTTGGCAAAAACAATTTATTCTCGGCTATTTGACTGGTTGGTGGACAAGATTAATAATTCAATCGGACAAGATCCAAATTCCAAATGTTTGATTGGGGTCCTTGATATCTATGGTTTTGAAAGCTTTAAAACTAACAGTTTTGAGCAGTTCTGCATCAATTTCACAAATGAGAAGTTGCAGCAACATTTCAACCAGCACGTCTTTAAAATGGAACAAGAAGAATATACAAAAGAGCAGATTGACTGGAGCTACATTGAATTTGTTGATAATCAAGATGTTTTAGACCTTATCGAAAAGAAACCTGGAGGAATTGTCGCTCTCCTTGATGAAGCTTGCATGTTTCCCAAGTCAACACATGAAACATTTGCAAATAAGCTTTATCAAACATTTAAGACTCACAAGCGTTTTATAAAGCCGAAATTGTCTCGAACAGACTTCACCGTAGCTCATTATGCTGGGGAGGTCCTATACCAGTCTGACCAGTTTTTAGACAAAAATAAAGATTACGTGGTTGCTGAACATCAAGATTTGTTGAGCGCTTCCAAATGTCCTTTCGTAGCAGGTCTTTTTCCTCCTCTTCCTGAAGAGTCTTCTAAATCATCGAAGTTTTCTTCAATAGCTTCTCGTTTTAAGCTACAACTACAGCAACTAATGGAAACATTGAACTCGACAGAACCTCATTATGTCAGATGTATAAAACCAAACAATGTCCTTAAGCCTGCAATATTTGAGAATGTCAACATTATGCAACAACTTCGCTGTGGTGGTGTTCTAGAGGCAATCAGAATTAGTTGCGCTGGTTACCCTACTCGCCGTCTTTTCTTTGAATTTGCTCACAGATTTGGAATCCTTGCCCCAGAGGTCGCGGATGGAAACTCTGATGAAAAGGTTGTTTGCCAAAAGATTCTGGAGAAAGTGGGTCTTAAAGGATACCAGATTGGGAAAACAAAGATATTCCTGAGAGCAGGTCAGATGGCTGAACTAGATGCACAGAGGGCTCAAGTACTCGGTCGGGCTGCCAAAATTATCCAACGGCGCATACGGACCCATCAAGCTCGTAATCATTATGTTGCATTGCGTAGAACTACTGTATTCATGCAGTCTCTATGTAGAGGAAGACTGGCGTGCAAACATTATGAAAACATGAGAAGGGAGGCCGCTGCAAAGAAAATTCAGAAAAATGTGCGCGGATATGCAGCTAGGAAAGCCTACAAAAGACTCCAAGCTTCAGTACTTGTCTTGCAAACTGGTTTAAGGACAATGGGTGCTCGTAATCAGTTCAGATTTAGGAAGCGGACTAAAGCTGCAGTCATTATTCAGGCTTGGTGGCGATGCCGGAAGGCTACTATATATTATAAGAGGCTCAAGAAAAGTACTATAGTTGCACAATGCAGATGGAGGGGGCGATTGGCCAGGAGAGAACTTAGGAAACTCAAAATGGCTGCAAGAGAAACTGGTGCGCTTAAAGAAGCAAAGGATAAGCTGGAAAAACGAGTGGAGGAACTCACTTGGCGCTTGCAATTAGAAAAAAGTTTAAGGACTAACCTAGAAGAAGCCAAAGCACAAGAAGTAGCAAAACTGCAGAACTCATTACAAGAGATGCAGAACAAGATTGATGAAACCAATGCTTTACTTGTCAAGGAGCGGGAGAATGCAAAGAAAGTTGTAGAAGAAGCACCTCCTGTTATTCAAGAAACACAAGTTGTAGTGGAAGACACACACAAGATTGAGTCACTAACGGGGGAAGTTGAGAGTCTGAAGACTTCATTAGAGTCAGAGAAACAAAAAGCTGAAGATTTTGAAAGAAAATACAATGAGTCTCAAGCTTTTAGTGAAGAACAAAGTAAAAAATTAGAGGACACAGAGAAAAAGGTTCGTCAACTCCAGGAATCGTTAACCAGGCTGGAAGAGAAAACTACTAATTTAGAATCAGAGAATCGGGTACTACGTCAGCAAGCTGTATCCATGACACCAAATAAGTTTCTTTCAGGACGCTCTAGATCTATTATACAGAGAGGTGCTGAAAGTGGTCATATAATCGGAGAAGCGAAGATACCCTTGGATCTTCATAGCTCATCAATTAACCAGAGGGAACATGCTGAAGTAGATGATAAACCACAAAAGTCACTAAATGAGAAACAGCAGGAAAATCAAGAGTTGCTCATCAGATGTATTGCGCAACATGTAGGCTTTGCCGGGAACAGACCTGTTGCTGCATGTATCATATACAAATGTCTCTTACATTGGAGATCATTTGAAGTAGAGCGCACCAGCGTTTTTGATCGTATCATTCAAACTATTGGCAATGCAATTGAGACCCAGGACAACAATGATACCTTGGCTTATTGGTTATCCAATGCATCCACACTTCTATTGTTACTCCAGCGCACACTTAAGGCAAGTGGTGCTGCTGGAATGGCCCCACAACGCCGTCGTTCTTCATCTGCAACCCTATTTGGGAGAATGACACAGAGTTTCCGTGGAAGCCCTGCAGGAGTTAATCTCTCCTTAATCAATGGTAGCGTAAGCGGTGGAGTAGATACATTGCGACAAGTTGAAGCTAAGTACCCAGCTTTGCTTTTCAAACAGCAGCTTACTGCGTATGTAGAAAAAATATATGGAATGATTCGGGATAATCTAAAGAAAGAAATTTCTCCCCTGCTAGGTTTGTGCATCCAGGCACCAAGAACATCCAGAGCAAGCTTGGTTAAGGGATCGCTTACAGTTGCAAATACTGAAGCTCAGCGAGCTTTGATTGCTCACTGGCAGGGGATAGTTAAGAGCCTTGGGAGCTTTTTGAATACTTTGAAAGCAAATCATGTTCCCCCATTTTTAGTTCGCAAGGTGTTCACTCAAATTTTTTCTTTCATCAATGTTCAACTATTCAACAGTCTCCTTTTAAGAAGGGAATGCTGCTCATTTAGTAATGGTGAATATGTCAAAGCTGGTTTGGCTGAATTGGAGCATTGGTGTTATAAGGCGACAGACGAGTATGCGGGTTCAGCGTGGGATGAGCTGAAACATATCAGACAGGCGATTGGATTTCTGGTCATACACCAGAAACCTAAGAAAACACTGGATGAAATAAGCCATGACCTGTGCCCGGTCCTCAGCATCCAGCAGTTATATCGGATTAGCACAATGTACTGGGATGACAAGTATGGCACACATAGTGTGGCACCTGATGTCATTTCCAATATGAGAGTGTTGATGACCGAAGATTCAAATAACGCCGTTAGTAGTTCTTTCCTGCTGGATGATGATTCAAGCATCCCGTTTTCTGTGGATGATCTGTCAAAGTCGATGGAACAAATAGATATATCCGATGTTGAGGCCCCACCACTTATTCGTGAGAACTCCGGGTTTAGTTTCTTGTTGCCAAGCCCAGATTGA | 4614 | 0.4157 | MMIPHLNLQGTPVNIIVGSHVWIEDPDVAWIDGQVSKINGKDAEIETTNGKKVSAKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKSRYELNEIYTYTGNILIAINPFQRLPHLYDPHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEEIEKYKLDNPRSFHYLNQSNFYELADVSDAREYLATRRAMDVVGISQKDQEAIFRVVAAILHLGNIAFAKGKEVDSSVPKDDKAKFHLKTTAELLMCDADALQDALCKRVMVTPEEVIKRSLDPQSALISRDGLAKTIYSRLFDWLVDKINNSIGQDPNSKCLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQIDWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFIKPKLSRTDFTVAHYAGEVLYQSDQFLDKNKDYVVAEHQDLLSASKCPFVAGLFPPLPEESSKSSKFSSIASRFKLQLQQLMETLNSTEPHYVRCIKPNNVLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRLFFEFAHRFGILAPEVADGNSDEKVVCQKILEKVGLKGYQIGKTKIFLRAGQMAELDAQRAQVLGRAAKIIQRRIRTHQARNHYVALRRTTVFMQSLCRGRLACKHYENMRREAAAKKIQKNVRGYAARKAYKRLQASVLVLQTGLRTMGARNQFRFRKRTKAAVIIQAWWRCRKATIYYKRLKKSTIVAQCRWRGRLARRELRKLKMAARETGALKEAKDKLEKRVEELTWRLQLEKSLRTNLEEAKAQEVAKLQNSLQEMQNKIDETNALLVKERENAKKVVEEAPPVIQETQVVVEDTHKIESLTGEVESLKTSLESEKQKAEDFERKYNESQAFSEEQSKKLEDTEKKVRQLQESLTRLEEKTTNLESENRVLRQQAVSMTPNKFLSGRSRSIIQRGAESGHIIGEAKIPLDLHSSSINQREHAEVDDKPQKSLNEKQQENQELLIRCIAQHVGFAGNRPVAACIIYKCLLHWRSFEVERTSVFDRIIQTIGNAIETQDNNDTLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGSPAGVNLSLINGSVSGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSLTVANTEAQRALIAHWQGIVKSLGSFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVAPDVISNMRVLMTEDSNNAVSSSFLLDDDSSIPFSVDDLSKSMEQIDISDVEAPPLIRENSGFSFLLPSPD | 1537 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele2000087g0078 | 1537 | PANTHER | MYOSIN | 62 | 1468 | - | - | |
| Lele2000087g0078 | 1537 | CDD | MYSc_Myo11 | 84 | 728 | IPR036018 | - | |
| Lele2000087g0078 | 1537 | ProSiteProfiles | IQ motif profile. | 791 | 818 | IPR000048 | GO:0005515 | |
| Lele2000087g0078 | 1537 | SMART | MYSc_2a | 65 | 741 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele2000087g0078 | 1537 | PRINTS | Myosin heavy chain signature | 100 | 119 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele2000087g0078 | 1537 | PRINTS | Myosin heavy chain signature | 437 | 465 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele2000087g0078 | 1537 | PRINTS | Myosin heavy chain signature | 157 | 182 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele2000087g0078 | 1537 | PRINTS | Myosin heavy chain signature | 490 | 518 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele2000087g0078 | 1537 | PRINTS | Myosin heavy chain signature | 204 | 231 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele2000087g0078 | 1537 | FunFam | Myosin heavy chain | 260 | 315 | - | - | |
| Lele2000087g0078 | 1537 | Coils | Coil | 885 | 965 | - | - | |
| Lele2000087g0078 | 1537 | Gene3D | - | 674 | 741 | - | - | |
| Lele2000087g0078 | 1537 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 45 | 793 | IPR027417 | - | |
| Lele2000087g0078 | 1537 | ProSiteProfiles | IQ motif profile. | 745 | 770 | IPR000048 | GO:0005515 | |
| Lele2000087g0078 | 1537 | Pfam | Myosin N-terminal SH3-like domain | 17 | 59 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele2000087g0078 | 1537 | SMART | iq_5 | 765 | 787 | IPR000048 | GO:0005515 | |
| Lele2000087g0078 | 1537 | SMART | iq_5 | 838 | 860 | IPR000048 | GO:0005515 | |
| Lele2000087g0078 | 1537 | SMART | iq_5 | 813 | 835 | IPR000048 | GO:0005515 | |
| Lele2000087g0078 | 1537 | SMART | iq_5 | 742 | 764 | IPR000048 | GO:0005515 | |
| Lele2000087g0078 | 1537 | SMART | iq_5 | 861 | 883 | IPR000048 | GO:0005515 | |
| Lele2000087g0078 | 1537 | SMART | iq_5 | 790 | 812 | IPR000048 | GO:0005515 | |
| Lele2000087g0078 | 1537 | FunFam | unconventional myosin-Va | 794 | 841 | - | - | |
| Lele2000087g0078 | 1537 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 793 | 891 | IPR027417 | - | |
| Lele2000087g0078 | 1537 | FunFam | unconventional myosin-Va | 745 | 793 | - | - | |
| Lele2000087g0078 | 1537 | Pfam | IQ calmodulin-binding motif | 864 | 883 | IPR000048 | GO:0005515 | |
| Lele2000087g0078 | 1537 | Pfam | IQ calmodulin-binding motif | 840 | 859 | IPR000048 | GO:0005515 | |
| Lele2000087g0078 | 1537 | Pfam | IQ calmodulin-binding motif | 745 | 763 | IPR000048 | GO:0005515 | |
| Lele2000087g0078 | 1537 | Pfam | IQ calmodulin-binding motif | 793 | 812 | IPR000048 | GO:0005515 | |
| Lele2000087g0078 | 1537 | Gene3D | - | 447 | 631 | - | - | |
| Lele2000087g0078 | 1537 | Gene3D | - | 260 | 318 | - | - | |
| Lele2000087g0078 | 1537 | ProSiteProfiles | Dilute domain profile. | 1168 | 1480 | IPR002710 | - | |
| Lele2000087g0078 | 1537 | CDD | MyosinXI_CBD | 1119 | 1503 | IPR037975 | GO:0007015 | |
| Lele2000087g0078 | 1537 | SMART | DIL_2 | 1355 | 1462 | IPR002710 | - | |
| Lele2000087g0078 | 1537 | ProSiteProfiles | IQ motif profile. | 766 | 795 | IPR000048 | GO:0005515 | |
| Lele2000087g0078 | 1537 | Gene3D | Kinesin motor domain | 73 | 670 | IPR036961 | - | |
| Lele2000087g0078 | 1537 | FunFam | Myosin 2 | 320 | 433 | - | - | |
| Lele2000087g0078 | 1537 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 320 | 609 | - | - | |
| Lele2000087g0078 | 1537 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 16 | 65 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele2000087g0078 | 1537 | MobiDBLite | consensus disorder prediction | 1006 | 1029 | - | - | |
| Lele2000087g0078 | 1537 | Pfam | DIL domain | 1356 | 1459 | IPR002710 | - | |
| Lele2000087g0078 | 1537 | Pfam | Myosin head (motor domain) | 72 | 728 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele2000087g0078 | 1537 | FunFam | unconventional myosin-Va | 842 | 889 | - | - | |
| Lele2000087g0078 | 1537 | ProSiteProfiles | IQ motif profile. | 862 | 891 | IPR000048 | GO:0005515 | |
| Lele2000087g0078 | 1537 | ProSiteProfiles | Myosin motor domain profile. | 70 | 740 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele2000087g0078 | 1537 | Coils | Coil | 1018 | 1059 | - | - | |
| Lele2000087g0078 | 1537 | Coils | Coil | 983 | 1010 | - | - | |
| Lele2000087g0078 | 1537 | FunFam | Class V myosin | 447 | 588 | - | - | |
| Lele2000087g0078 | 1537 | Gene3D | - | 793 | 840 | - | - | |
| Lele2000087g0078 | 1537 | Gene3D | - | 743 | 792 | - | - | |
| Lele2000087g0078 | 1537 | Gene3D | - | 841 | 890 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele2000087g0078 | 10 | 1537 | Myosins gene family | AT1G54560 | 83.715 | 0.0 | 2694 |