Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000087g0061 ATGAGGCTCACTCGATTTTTCCCTCTCGACATCTGGATCAACAACATATTTGATGCTTTCCAGCCAGTTTTGAAGATACTGGATTTTTGCATTACCTGCAATAATAACACAACCAAGTGCAGATATATTTGGTATTGCCTTCGTAAGAAGTTACTAATGGGGACAGAACTCACTAGAACATGTGTTCAAGAAGAGAACGATGAGTTTCCATCAGTTCCACCTGGCTTTGAGTCATATACATCTTCCTCACTGGATAGGGGGGAAGGCATTGAGAAACAGAATGACAAAAACATTACTAGTTTTTCAGTCTCTACAAGTGTTTCTAATTGTAAATTACACTCAATTCAGGCTAAAACCGATGTTCAAGCTAGTGATACTGCAAAGGTTCCTAGGTCCCTTGGACGAAGACGATGGATCAACCATGGACGGTATGATAACAGTTCAGAGGAAGACTCTGATTCTGAGCGGCTTGATCAAAATTTCTCATCAGTACCTTGTCTTCCAAAGGGAGTTATCCGTGGATGTCCAGATTGCAGTAATTGCCAAAAGGTTATTGCCAGATGGAGGCTGGAAGATGCTTGCAGGCCCACCCTTGAGGATGCTCCTGTTTTTTACCCAACCGAAGAGGAGTTTCAAGATCCCATGAAATATATAGCAAGTATTTGTTCTAGAGCAGAACCTTATGGCATTTGTCGCATCGTTCCCCCTTCATCTTGGAAGCCCCCTTGTCCTCTTAAGGGAAAGACTATATGGGGGGATTCTAAATTTGCTACTCGTGTTCAGAGGATTGATAAGCTCCAGAACCGTTATTCAATGAGAAAGATGTCAAGGATTCATTTTAATACTAGACAGAAAAGGAAAAGATGCCCTAGAATGGGATTGGATAATGGCAGTAATAGAGGACCTAATGCAGGATTTTGTGAGATTGAAAGGCCCTTTGGGTTTGAACCCGGACCAGAATTTACTTTAGAAACATTTCAGAGATACGCAGATGAATTTAAGGCCAGATACTTCAGAAAGAATGAGAATATATCTAATATGGGAGGTAACACAACAATGGCAAAAGGATGGGAGCCTTCTGTGGAGAACATAGAGGGTGAATATTGGCGAATGGTGGAGAGACCTACTGAAGAAATTGAGGTGCTCTATGGAGCTGACCTGGAAACTGGGGTTTTTGGGAGTGGTTTTCCCAGAAAGCTTAGTGAAGTTGGTTCTGATTCACACAAAGAGTACGTAAATTCCGGCTGGAATTTAAATAACTTTGCTAGGCTTCCTGGATCTCTACTTTCATATGAAAGCAGCAATATATCTGGTGTCCTTGTGCCCTGGTTGTATATAGGAATGTGCTTTTCTTCCTTTTGTTGGCATGTGGAGGATCATCATTTATATTCATTGAATTACATGCATTGGGGTGCTCCAAAAATGTGGTATGGTGTCCCTGGCAAAGATGCTTGCAAATTGGAAGAGGCCATGAGAAAGCATTTACCGGACCTTTTTAAAGAGCAACCTGATTTGCTTCATAAGTTGGTCACTCAGCTTTCTCCTTCTATCCTCAAGTCTGAAGGAGTACCTGTCTATAGGTGTGTCCAGAATGCTGGAGAGTTTGTTCTGACATTCCCTCGAGCTTATCATTCTGGCTTCAATTGTGGCTTCAACTGTGCAGAGGCTGTAAATGTAGCTCCAGTTGACTGGCTGCCCCATGGGCAGATTGCCATTGAGCTATACCGGGAGCAAGGACGTAAGACTTCCATATCTCATGATAAATTGTTGCTTGGGGCTGCTAGGGAAGCAGTACGAGCACTGTGGGAGCTTAATCTGCTGAAAAAGAATACTTCAGATAATCTAGGATGGAAAGATGTCTGTGGAAAAGACGGTGTTCTAGCAAAAGCACTCAAGACACGTGTTGAGATGGAACAAGTAAGGAGGAAATTTCTCTGCAGTTCTTCACAGGCATTGAAAATGGAGAGCAGTTTTGATGCCACAAGTGAAAGGGAATGCAGTGTTTGCTATTTTGATCTACACTTATCTGCAGCTGGTTGCCATTGTTCCTCAGACCGATATGCTTGCTTGGATCATGCAAAGCAGTTATGTTCATGTGCATTGGATTCCAAATTCTTCCTCTTCCGTTATGATATTAGTGAATTGCTTATCCTTGTTGAGGCATTGGAAGGAAAATTAAGTGCAGTATACAGATGGGCAAAATTAGATCTTGGGCTGGCGCTAACTTCTATATCAAAGGACAAAAGCCAATGTGGCAACTTGATTCAGTCTTCAAAGGAAACAATGCTTCACAAGTTGAGATTAGATTCGTCAGATCTGTCTGGTTCTTCTTGTGGCACCACGCTTAAAGAGATGACATTGCATCCGTCAGTTGTTTCTATTGAAGATTCTCATTTGATAGATGTCCCAATAGAGAATCTTATGACTGCCGCAAAAGGCATTGATCAGGGTTTTATAAAATTAAGAAAATCAACAGAAGAGGCAATTCCCTTTGGTTATTCAAAAGAACTGTCTACATCTAATGGCTGGACAACCCCTTGTGAGATGACTAGTCATGAGAGATATTCTGAGAAAGAATCAACTATTTGCAAATCTGCTGTCGGGAATCCTGTTCGTCAGTTGCCTGTAGGAGACACTTCATATTCTATACCTCTTCCTTTAGCTGAACATGGACCTAAGAAAACTCCTTGTGGGCACGATAATGTTATACTTCTTAGTGATGACGAAACTGATGAACCTAAGATGACAGAAACAGATAACAAGAAGGAGCTTTCTCAAAGGCTTGTGGGTTCTTGTGATAATCTAAACCCATGTAATTATAGAGAAGATCCAGACAGGACTATCCCTGTCACAAATGCTGCTTTAAAGGTTGGGAATGATTTGCCTCATGAAAATATGAGTTCTCATTCAACTCAACATTTGCATGTGAAACGGGAACATGATATAATTAAGGGAGCAGTTTTAGATTCTACTCCAGTAGTTTTTTCCTGCAATATAGGTTATGGTAGTGCAGAATCAGTCGGACAAATTCAGGCTTGCTCAACAGGAGAGAGTAGAGATCATTGTCTGGATTCTTCTGGGAGTTGTCCTCTGAATCCAGAGCATTCTGGGACTGTCAAGCCTAAGAACGAGGACAACCATGAGAAGATTGGAGTATGTATTGCAGATAATGCTAGAGCTGTTAATGGCAACCTGTCTTGCTGTCCAAACAATTTGGGAAGATACTATCGTCAGAAAGGTCCTCGTATAGCAAAGGTTGTCCGGCGCATCAACTGCAATGTTGAGCCTCTAGAATTTGGAATTGTGTTTTCTGGGAAGTCATGGTGCAACAGTCGGACTATATTTCCGAAGGGATTTAGAAGCCGTGTAAGATACATAAATGTCTTAGAGCCAACAAGTATGTGTTATTATATTTCAGAAATTCTTGATGCTGGACGTGATGGGCCTCTGTTTATGGTCTCCTTGGAACATCACCCAAGTGAGGTCTTCATTCATCTTTCTGCCGGTAGATGCTGGGAACTGGTGAGAGAGAGAGTGAATCTGGAGATCACAAAGCAACATAATCTGGGAAGAAAGGACCTACCACCTTTGCAGCCACCTGGCAGCATTGATGGCTTTGAAATGTTTGGGTTTTCTTCTCCTGCAATAGTGCAGGCTATCGAGGCATTGGATCAAAATCGTGTTTGTAAGGAATATTGGGATTCGCGGCCCTATTCACGGCCTCTAGGGCGAATTCAACAAGCTTCACAGCCCAAAGAAAATGGTGGAAGTGCGGATGGGCCATTCCAGGGGGGAAATGTTCAAGGGGCTCACAGAAATGAGGGGATGCCTGTTGGAATAGATGCAGTATTGAGGAGGCTGTTAAAAAAAGCCGATGCACAAGAATTGAACTCATTGCGCAGCATTCTTTGTGACAATAACAATACTGCAACTGAGGGCAGCCTAATTGTTCAACTTCTCAATGAAGAGATCAGAAGTCGTCCCAGATGA 3990 0.4223 MRLTRFFPLDIWINNIFDAFQPVLKILDFCITCNNNTTKCRYIWYCLRKKLLMGTELTRTCVQEENDEFPSVPPGFESYTSSSLDRGEGIEKQNDKNITSFSVSTSVSNCKLHSIQAKTDVQASDTAKVPRSLGRRRWINHGRYDNSSEEDSDSERLDQNFSSVPCLPKGVIRGCPDCSNCQKVIARWRLEDACRPTLEDAPVFYPTEEEFQDPMKYIASICSRAEPYGICRIVPPSSWKPPCPLKGKTIWGDSKFATRVQRIDKLQNRYSMRKMSRIHFNTRQKRKRCPRMGLDNGSNRGPNAGFCEIERPFGFEPGPEFTLETFQRYADEFKARYFRKNENISNMGGNTTMAKGWEPSVENIEGEYWRMVERPTEEIEVLYGADLETGVFGSGFPRKLSEVGSDSHKEYVNSGWNLNNFARLPGSLLSYESSNISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDACKLEEAMRKHLPDLFKEQPDLLHKLVTQLSPSILKSEGVPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRALWELNLLKKNTSDNLGWKDVCGKDGVLAKALKTRVEMEQVRRKFLCSSSQALKMESSFDATSERECSVCYFDLHLSAAGCHCSSDRYACLDHAKQLCSCALDSKFFLFRYDISELLILVEALEGKLSAVYRWAKLDLGLALTSISKDKSQCGNLIQSSKETMLHKLRLDSSDLSGSSCGTTLKEMTLHPSVVSIEDSHLIDVPIENLMTAAKGIDQGFIKLRKSTEEAIPFGYSKELSTSNGWTTPCEMTSHERYSEKESTICKSAVGNPVRQLPVGDTSYSIPLPLAEHGPKKTPCGHDNVILLSDDETDEPKMTETDNKKELSQRLVGSCDNLNPCNYREDPDRTIPVTNAALKVGNDLPHENMSSHSTQHLHVKREHDIIKGAVLDSTPVVFSCNIGYGSAESVGQIQACSTGESRDHCLDSSGSCPLNPEHSGTVKPKNEDNHEKIGVCIADNARAVNGNLSCCPNNLGRYYRQKGPRIAKVVRRINCNVEPLEFGIVFSGKSWCNSRTIFPKGFRSRVRYINVLEPTSMCYYISEILDAGRDGPLFMVSLEHHPSEVFIHLSAGRCWELVRERVNLEITKQHNLGRKDLPPLQPPGSIDGFEMFGFSSPAIVQAIEALDQNRVCKEYWDSRPYSRPLGRIQQASQPKENGGSADGPFQGGNVQGAHRNEGMPVGIDAVLRRLLKKADAQELNSLRSILCDNNNTATEGSLIVQLLNEEIRSRPR 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000087g0061 1329 Pfam jmjN domain 202 235 IPR003349 -
Lele2000087g0061 1329 ProSiteProfiles JmjN domain profile. 201 242 IPR003349 -
Lele2000087g0061 1329 Gene3D - 1094 1230 - -
Lele2000087g0061 1329 ProSiteProfiles FYR domain FYRC motif profile. 1146 1236 IPR003889 GO:0005634
Lele2000087g0061 1329 PANTHER LYSINE-SPECIFIC DEMETHYLASE 193 1030 - -
Lele2000087g0061 1329 MobiDBLite consensus disorder prediction 1247 1274 - -
Lele2000087g0061 1329 Gene3D Cupin 186 560 - -
Lele2000087g0061 1329 Pfam F/Y-rich N-terminus 1100 1141 IPR003888 GO:0005634
Lele2000087g0061 1329 SMART JmjN_1 200 241 IPR003349 -
Lele2000087g0061 1329 SMART fyrc_3 1150 1244 IPR003889 GO:0005634
Lele2000087g0061 1329 ProSiteProfiles JmjC domain profile. 413 576 IPR003347 -
Lele2000087g0061 1329 ProSiteProfiles FYR domain FYRN motif profile. 1086 1144 IPR003888 GO:0005634
Lele2000087g0061 1329 SMART cupin_9 413 576 IPR003347 -
Lele2000087g0061 1329 SMART fyrn_3 1100 1144 IPR003888 GO:0005634
Lele2000087g0061 1329 Pfam JmjC domain, hydroxylase 443 559 IPR003347 -
Lele2000087g0061 1329 Pfam F/Y rich C-terminus 1148 1232 IPR003889 GO:0005634
Lele2000087g0061 1329 FunFam Putative lysine-specific demethylase JMJ16 1092 1230 - -
Lele2000087g0061 1329 Pfam C5HC2 zinc finger 666 715 IPR004198 -
Lele2000087g0061 1329 SUPERFAMILY Clavaminate synthase-like 320 603 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000087g0061 53 1327 JUMONJI Transcription Factor Family AT1G08620 53.215 0.0 1205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lele2000087g0061 JmjC 2.5e-46 CL0029