Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000087g0050 ATGGCCTCTTGCCCGCCACTGACGCCTCCCACTTGGTCTTCCCCCATTTCGTGCCCTCTGTCCGGCTCCTCCCAATTAGAACCCCCGAAGAGGAAGAGGGGCAGGCCCAGGAAGTACGGCACCCCGGAGCAAGCTCTAGCCGCCAAGAAAGCTGCCACCTCCTCCTCTCACTCTTTCAACAGGGATAAAAAGGCCCACGCTCTGGGCAGTTCCTCTGCTTCGTCTTCGTACACAGCCTCCTCCAAGAAATCCCAATTCTCTTCACTAGGTGGGTTCCTTCTGCTCTTCTTTAGGGCACATTTAGGTCAAGGCTTCACCCTACATGTCATTACTGTTACTGCTGGTGAGATGGCTGGTTTGTCCGTCACTAGCTATTACTCACCTGAACACCTAGCATTTCGTATAGATTTTTCTATAGTTGTGCAGCCTTGGTGGTTGTAGGTGCAACTAAAGGCACCTACCATGGGTCTGGGCGAAGGCACAAAAGGATGTGTCACAGAGATCCTGCTAACATTCAGACAAGTGATCCCATGTGATCTGATAGAATTAAAGCGGGAAATGTGCATCTTATCCGCATCTGGTTCCATCTCTAATGCCTCTCTTCGTCAGCCTGCAACTTCTGGAGGCAGTATCGCATATGAGTCTTGTGATTATGCACTTTCATTTGCGTGGAAGGGTCGATTTGAGATTATTTCACTTTCTGGTTCCTACATTCGTACTGAACTTGGAGGGCGCGCTGGTGGTCTTAGTGTATGCTTATCGAGTACTGATGGTCAAATCATAGGTGGAGGAGTTGGTGGACCCCTAAAAGCTGCTGGTCCAGTTCAGGTCATTGTTGGTACATTTTTTCTGGACGCCAAGAAGGATGCTGGATCTAGTGCTGGTGTAAAAGGTGATGCTTCTGGGAGCAAGTTGGCATCATTGGTTAGGGAATCGGTATCAAGTTTAGGTTACCAGCCGGGCATAGAAACTTCCAGTGGGAATCCAATTCTTGGGAATGATGATCATCATGCTGTTGGAGGGAGTCATTTCATGATTCAACAACGCGGTGTGCATGTGACACCTTCCCAACCCACAGAGTGGTGGGCTCGTCCTGATTCCAGAAATTCTGGCTTTGAACAAATGAAAGGAAAAACAGGCCATGGGGCTCACCAATCTCCAGAGAATGGGGATTATTTAACATGA 1185 0.4903 MASCPPLTPPTWSSPISCPLSGSSQLEPPKRKRGRPRKYGTPEQALAAKKAATSSSHSFNRDKKAHALGSSSASSSYTASSKKSQFSSLGGFLLLFFRAHLGQGFTLHVITVTAGEMAGLSVTSYYSPEHLAFRIDFSIVVQPWWLXVQLKAPTMGLGEGTKGCVTEILLTFRQVIPCDLIELKREMCILSASGSISNASLRQPATSGGSIAYESCDYALSFAWKGRFEIISLSGSYIRTELGGRAGGLSVCLSSTDGQIIGGGVGGPLKAAGPVQVIVGTFFLDAKKDAGSSAGVKGDASGSKLASLVRESVSSLGYQPGIETSSGNPILGNDDHHAVGGSHFMIQQRGVHVTPSQPTEWWARPDSRNSGFEQMKGKTGHGAHQSPENGDYLT 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000087g0050 394 CDD DUF296 182 282 IPR005175 -
Lele2000087g0050 394 MobiDBLite consensus disorder prediction 1 56 - -
Lele2000087g0050 394 ProSiteProfiles PPC domain profile profile. 147 309 IPR005175 -
Lele2000087g0050 394 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 23 116 IPR039605 GO:0003680
Lele2000087g0050 394 MobiDBLite consensus disorder prediction 318 339 - -
Lele2000087g0050 394 Gene3D - 182 297 - -
Lele2000087g0050 394 SUPERFAMILY AF0104/ALDC/Ptd012-like 185 282 - -
Lele2000087g0050 394 MobiDBLite consensus disorder prediction 357 394 - -
Lele2000087g0050 394 Pfam Plants and Prokaryotes Conserved (PCC) domain 185 282 IPR005175 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000087g0050 15 392 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 42.025 1.42e-66 215