Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000087g0040 ATGGCAAAGACTGGCGTCTCTGAAAACGACTTAACTTTGCTTCCCCATGCAAAGGCTTTGAATTTGAAGCACAAACTGCGGGGTCTCGTCAATATTATCCTGGATTCCGATGATTTCCCTCTGGCCAGCCTTGACGAAGCTATTACAACTCTTTCTGCTCTCAAGGATTTGAAATGTAAATCTACCGGCTTCTTCCCTCAGAAACTCCATCATTTGTCTATTCCCCCGGAATTTCGATGCCCCATATCTCTAGAGCTAATGAGTGATCCTGTTATCCTGGCCACGGGACAGACTTATGATCGGCCTTTTATCCAAAGATGGTTAAATGAAAGCCGCAGGACCTGCCCTCAAACACAGCAAGTCCTTTCTCACTCCATCCTTACTCCAAATCATCTGGTCCGTGACATGATTTCACATTGGTGCAAGGAGAACGGGGTTGAGTTGCCTAAGCCTATTCGGGACATTGATGAAGAAGTAATAACTGGTGCAGACAGAAGCCACTTAAATTCATTGCTCAAGAAGTTGTCAATGTCTATTTCTGATCAGAAAGAAGCTGCAAAAGAGCTCCGGCTATTAACAAAGCGAATGCCCTCATTTCGAATCCTTTTTAACGAGTCCAGTGATGTGATATTGCAGTTGCTCAGTCCATTGTCACCTGGTACGGCTTATATCCCTCCTGACCTTCACGAGGACTTGATCACTACTGTTCTAAATCTATCAATTCATGATGACAATAAGAAAATGTTTGCTGAGAATCCCACGGACCACGGTCATCCCTCTGGTGATCGAGTCCTTAAAATTGGGAACCATCCAAACAAGAAGTAA 825 0.4424 MAKTGVSENDLTLLPHAKALNLKHKLRGLVNIILDSDDFPLASLDEAITTLSALKDLKCKSTGFFPQKLHHLSIPPEFRCPISLELMSDPVILATGQTYDRPFIQRWLNESRRTCPQTQQVLSHSILTPNHLVRDMISHWCKENGVELPKPIRDIDEEVITGADRSHLNSLLKKLSMSISDQKEAAKELRLLTKRMPSFRILFNESSDVILQLLSPLSPGTAYIPPDLHEDLITTVLNLSIHDDNKKMFAENPTDHGHPSGDRVLKIGNHPNKK 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000087g0040 274 SMART Ubox_2 77 140 IPR003613 GO:0004842|GO:0016567
Lele2000087g0040 274 ProSiteProfiles U-box domain profile. 73 147 IPR003613 GO:0004842|GO:0016567
Lele2000087g0040 274 PANTHER U BOX DOMAIN-CONTAINING 36 250 - -
Lele2000087g0040 274 MobiDBLite consensus disorder prediction 248 274 - -
Lele2000087g0040 274 FunFam RING-type E3 ubiquitin transferase 73 147 - -
Lele2000087g0040 274 SUPERFAMILY RING/U-box 69 151 - -
Lele2000087g0040 274 CDD RING-Ubox_PUB 78 120 IPR045210 -
Lele2000087g0040 274 Pfam U-box domain 74 144 IPR003613 GO:0004842|GO:0016567
Lele2000087g0040 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 147 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000087g0040 43 252 U-box Gene Family AT5G18320 39.815 3.34e-43 151