Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000087g0034 ATGAATTGTTTCTCGTGTTTCACCTCCCAGAAAAGTAAGAAAAACCTTGCCGGCGGAGACCCTGAATCTACACCCCAAGATCATGTCGCTTCTAAACCCCAGGATAATGGAAACCAAGCTCAGACCCCAGATATTCACGCGCAGACATTCACTTTCCGCGAGCTAGCAACCGCCACCAAGAATTTCAGGCAGGAATGCCTGTTGGGTGAAGGTGGATTTGGCAGAGTGTACAAGGGCACCATTCCGGCAACCGGCAAGGTGGTAGCCGTGAAGCAATTGGATCGAAATGGGATGAATGGCAGCAAGGATTTTCTGACGGAGGTTGCAGTTTTGAGTCGCCTGAACCATGAAAATCTGGTGAATCTAGTTGGTTATTGTGCCGATGGGGACCAACGTCTTCTGGTGCATGAATACATGTCGGGGGGCTCTGTATATGATCGTCTGTTTGGCGAGTCTCCGTTGGATTGGTTCACCAGAATGAAAATAGCGTCGGGAGCAGCGAGCGGACTGGAGTATTTGCATGACAAGGCCAATCCACCAGTTGTTTACAGGGACTTGAAATCCTCGAATATCTTGCTGGATGACAATCTCAACCCCAAGCTCTCTGATTTTGGGCTCAACAAGCTTTCCGGGGGAGATCGGTCAAATCTTATATCCCCCGGAGTTACGGGTACTTATGGCTACTCCGCTCCCGAGTATACAAGGACCGGACACCTCACCTTGAAATCAGACGTCTACGGTTTTGGAGTCGTGCTGCTCGAGCTCATCACCGGACGACGAGCCATTGATACTACCAAACCCAATGAGGAGCAAAATCTAGTTTCATGGGCACAACCCTTATTCAGAAATCCAAAACAATTCCCAGAAATGGCGGATCCGCTGCTGAAGAAGCATTTCCCGGAAAAGGATCTAAATCAAGCGGTGGCAGTGGCCGCCATGTGCCTCCAGGAGGAAGAAGGGGCGAGGCCTTTGATGAGTGATGTGGTAACTACTCTGAGTTTCCTGTCCATGGTTCCACCGGAGGTAATTCCGGCATCGGCGTCGCCGGCCACCTTGCCCCCGCAGGATGATGGTTCCGACGAGGAGGAGGAGGAGGAAGAGGAGCAGGATTCTGATGGGACGGGAGGCGAATCAAGCCGAAGCAGCAGTGCGAGTTGGGAAGAGGGAAGCGTGACATCCAGCAAGAAATCGCGAGATTTAAGCAAGAAGAAAAGTAGCTCCAGAGATTTAAAGCAGAAGAGCAGCAAGAAGGGTGGAGGAAAAGTGTCGAGCAGAAAGAGCAGTAGAAAATCATCGAGAAGCAGGAAGATGAGCATGGAATCGGAGGAAGGAGGAGGAGAGGGAATGCACGAGAGAGGGAGCAGCAGGATGTCGTTTAGGGAAAGCATGAGCAGCAGCAGCGGTGCAGACAGCGACAGGGGCTCACCGGAAGGGGCCAAGCAGAGGCTGCAGCACGCCCATACGGCAAAACAACGTCCCAAGGATCCCCGTAGGGAACGACTCGCGGCTTCTAGTGCAAGAGTATAA 1527 0.5206 MNCFSCFTSQKSKKNLAGGDPESTPQDHVASKPQDNGNQAQTPDIHAQTFTFRELATATKNFRQECLLGEGGFGRVYKGTIPATGKVVAVKQLDRNGMNGSKDFLTEVAVLSRLNHENLVNLVGYCADGDQRLLVHEYMSGGSVYDRLFGESPLDWFTRMKIASGAASGLEYLHDKANPPVVYRDLKSSNILLDDNLNPKLSDFGLNKLSGGDRSNLISPGVTGTYGYSAPEYTRTGHLTLKSDVYGFGVVLLELITGRRAIDTTKPNEEQNLVSWAQPLFRNPKQFPEMADPLLKKHFPEKDLNQAVAVAAMCLQEEEGARPLMSDVVTTLSFLSMVPPEVIPASASPATLPPQDDGSDEEEEEEEEQDSDGTGGESSRSSSASWEEGSVTSSKKSRDLSKKKSSSRDLKQKSSKKGGGKVSSRKSSRKSSRSRKMSMESEEGGGEGMHERGSSRMSFRESMSSSSGADSDRGSPEGAKQRLQHAHTAKQRPKDPRRERLAASSARV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000087g0034 508 MobiDBLite consensus disorder prediction 27 43 - -
Lele2000087g0034 508 MobiDBLite consensus disorder prediction 344 508 - -
Lele2000087g0034 508 Gene3D Phosphorylase Kinase; domain 1 32 138 - -
Lele2000087g0034 508 MobiDBLite consensus disorder prediction 1 43 - -
Lele2000087g0034 508 MobiDBLite consensus disorder prediction 433 457 - -
Lele2000087g0034 508 ProSiteProfiles Protein kinase domain profile. 62 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000087g0034 508 Pfam Protein kinase domain 64 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000087g0034 508 MobiDBLite consensus disorder prediction 458 472 - -
Lele2000087g0034 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Lele2000087g0034 508 FunFam Serine/threonine-protein kinase PBS1 139 347 - -
Lele2000087g0034 508 PANTHER OS07G0668900 PROTEIN 3 338 - -
Lele2000087g0034 508 MobiDBLite consensus disorder prediction 418 432 - -
Lele2000087g0034 508 Gene3D Transferase(Phosphotransferase) domain 1 139 338 - -
Lele2000087g0034 508 MobiDBLite consensus disorder prediction 392 416 - -
Lele2000087g0034 508 CDD STKc_IRAK 68 332 - -
Lele2000087g0034 508 MobiDBLite consensus disorder prediction 1 19 - -
Lele2000087g0034 508 SMART serkin_6 62 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000087g0034 508 SUPERFAMILY Protein kinase-like (PK-like) 41 337 IPR011009 -
Lele2000087g0034 508 ProSitePatterns Protein kinases ATP-binding region signature. 68 91 IPR017441 GO:0005524
Lele2000087g0034 508 MobiDBLite consensus disorder prediction 375 391 - -
Lele2000087g0034 508 FunFam probable serine/threonine-protein kinase RLCKVII 34 138 - -
Lele2000087g0034 508 MobiDBLite consensus disorder prediction 356 372 - -
Lele2000087g0034 508 MobiDBLite consensus disorder prediction 475 508 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000087g0034 1 399 Glycoside Hydrolase AT3G07070 57.720 8.08e-159 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele2000087g0034 Pkinase 2.1e-46 CL0016