Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000087g0031 ATGAGCTCGAAGGAGAGACCCACTCTTGGTGGTACGCGGATTAAGACCCGCAAACGGAATATTGCAGCACCACTGGACCCTGCAGCATTTTCGGATGCAGTGGTCCAGATTTACTTGGATAATGCTGGTGATCTGGAACTTGTTGCTAAGAGCATTGAGTCCTCAGACCTTAACTTCTCAAGATACGGTGACACCTTTTTTGAGGCAAGCTCTCTGAAACAGTTGTATTCTGAGCGGCTACAGCTTTTGTTTCTGATTCATGCCAATATGATGTACCTGCCTGTTGCATTACCACAGGTTGTTTTCACTGGGGGGCGTACGCAACCTGGAACTACCAAGCCTGATGAGGGGGAGCGCCATCCTTACTCTATAATTGAGTGTGAGCCAAAGCGTGAAGTCATATCACCATCTGTAATCTACATACAGAAGATTTTGCGGCGGAGGCCTTTTCTTATCAAGAATCTTGAAAATGTCATGCGAAAATTTCTGCAGTCCTTGGAACTTTTTGAGGAAAATGAAAGGAAAAAGCTGGCAATCTTTACAGCACTTGCATTCTCCCAGAAGTTATCTGGTCTCCCGCCAGAAACTGTGTTCCAGCCACTTCTCAAAGATAATCTTGTGGCCAAAGGGTTAGTTCTATCATTTATAACTGACTTCTTTAAGGAGTATCTGGTTGACAACAGCCTTGATGATCTCATATCAATTCTGAAGCGGGGTAAAGTGGAGGACAATCTATTGGACTTCTTCCCCCCTGCGAAAAGATCTAATGATGCTTTCGCCGATCATTTCAACAAGGAAGGACTGGCAGCCTTGGTGGAGTATAATGAGAAGAAAATCTTTGAGGTAAAACTTAAAGAGATGAAATCTGCTCTGACAACCCAGATAACAGAGGAAACTGATATATCTGAAGTCATCGAAACCGTGAAGCTACGGGTTAGAGATGCTAAGTTACCAGACATAGAGGTTGTGAGGGTTCTGTGGGATGTCTTAATGGATGCTGTTCAGTGGTCAGGGAAAAATCAGCAACAGAATGCAAATGCAGCCCTGCGTCAGGTAAAAACTCGGGCGGAACTGTTGAATACTTTCTGCACCAGTGGGAAACTTGAGCTGGAACTGATGTACAAAGTACAGATGCAATGCTATGAGGATGCTAAACTGATGAAGCTCTTCCCTGAGATTATTAGGTCTCTTTATGACCAAGATGTGTTGGCAGAAGATACCATTCTCCATTGGTTCCGGAAAGGAACGAACACGAAGGGAAGGCAAACCTTCGTGAAGGCCCTGGAACCTTTTGTTAACTGGCTGGAGGAGGCTGAAGAGGAGGAATAG 1329 0.4477 MSSKERPTLGGTRIKTRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELVAKSIESSDLNFSRYGDTFFEASSLKQLYSERLQLLFLIHANMMYLPVALPQVVFTGGRTQPGTTKPDEGERHPYSIIECEPKREVISPSVIYIQKILRRRPFLIKNLENVMRKFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVAKGLVLSFITDFFKEYLVDNSLDDLISILKRGKVEDNLLDFFPPAKRSNDAFADHFNKEGLAALVEYNEKKIFEVKLKEMKSALTTQITEETDISEVIETVKLRVRDAKLPDIEVVRVLWDVLMDAVQWSGKNQQQNANAALRQVKTRAELLNTFCTSGKLELELMYKVQMQCYEDAKLMKLFPEIIRSLYDQDVLAEDTILHWFRKGTNTKGRQTFVKALEPFVNWLEEAEEEE 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000087g0031 442 CDD W2_eIF5C_like 247 435 IPR043510 -
Lele2000087g0031 442 FunFam ARM repeat superfamily protein 274 442 - -
Lele2000087g0031 442 Pfam eIF4-gamma/eIF5/eIF2-epsilon 369 442 IPR003307 GO:0005515
Lele2000087g0031 442 SUPERFAMILY ARM repeat 284 439 IPR016024 -
Lele2000087g0031 442 Coils Coil 152 172 - -
Lele2000087g0031 442 Gene3D - 284 438 - -
Lele2000087g0031 442 SMART 542_3 356 441 IPR003307 GO:0005515
Lele2000087g0031 442 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 2 68 - -
Lele2000087g0031 442 ProSiteProfiles W2 domain profile. 277 442 IPR003307 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000087g0031 331 438 Eukaryotic Initiation Factors Gene Family AT2G34970 31.818 4.78e-08 53.5