Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000087g0025 ATGTATTCTTTTTGTAAAAATATTTTTCGTTTCAATCTCTTTTCCCCGTGCTCATCCATCCACAGCTTTTTTGGGAAAGCAACCTTACACTTACGAAATAAAAGGCAGGATGGAGAATCGGATCTCAATACCGTTGATCAGTTATTTGTCCACCACATTGAATCTTGGACTGAGGGATTGATCATGGAGGACGGTGGTGACCGCCACATTCTGCTTCCGCCGCCTAATTTCTCTATGGTCGAGGACAACATTTTCCGGTCCAGTTTCCCGCGACCTCCCAATTTTCCCTTCCTCCGAACCCTAAATCTTCGATCTATCATATGCTTGTGTCCCGAACCATATCCGGAAGAAAATTTGAAATTTCTTCGGTCACAGGGCATTCGACTCTTTCAGTTTGGAATTGAGGGAAAGACGGAGGTTTCAGTACCTATTCTGAAGGACACTGTCATGGATGCTCTGAAAGTCTTAATTGATGTGAGAAATCACCCCCTTTTAATCCATTGCAAACAAGGAAAGCATCGAACAGGTTGTCTGGTAGGTTGCTTAAGAAAATTGCAGAAGTGGTGTTTGTCTTCAGTGTTTGAGGAGTACAACAGATTCGCTGGCGCGAAATCGAGGATAGCGGATTTAAAATTTATAGAATCGTTTGATATATTAAGCCTGAGGCAGTGCCTTTACAGCATTATATACCAGTACCAAGGATATAATTCAACCAAGAGGCGGTTGTTGTATAAAGAAGAGAATTTACAGAAGCCCCAAACGACATCCGTTTAG 774 0.4225 MYSFCKNIFRFNLFSPCSSIHSFFGKATLHLRNKRQDGESDLNTVDQLFVHHIESWTEGLIMEDGGDRHILLPPPNFSMVEDNIFRSSFPRPPNFPFLRTLNLRSIICLCPEPYPEENLKFLRSQGIRLFQFGIEGKTEVSVPILKDTVMDALKVLIDVRNHPLLIHCKQGKHRTGCLVGCLRKLQKWCLSSVFEEYNRFAGAKSRIADLKFIESFDILSLRQCLYSIIYQYQGYNSTKRRLLYKEENLQKPQTTSV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000087g0025 257 CDD PFA-DSP_Siw14 71 217 - -
Lele2000087g0025 257 Pfam Tyrosine phosphatase family 71 218 IPR004861 -
Lele2000087g0025 257 PANTHER TYROSINE-PROTEIN PHOSPHATASE 62 230 - -
Lele2000087g0025 257 PRINTS Plant and fungal dual specificity phosphatase signature 108 121 IPR020428 GO:0016791
Lele2000087g0025 257 PRINTS Plant and fungal dual specificity phosphatase signature 71 88 IPR020428 GO:0016791
Lele2000087g0025 257 PRINTS Plant and fungal dual specificity phosphatase signature 127 141 IPR020428 GO:0016791
Lele2000087g0025 257 PRINTS Plant and fungal dual specificity phosphatase signature 144 158 IPR020428 GO:0016791
Lele2000087g0025 257 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 72 216 IPR029021 -
Lele2000087g0025 257 FunFam probable tyrosine-protein phosphatase At1g05000 70 220 - -
Lele2000087g0025 257 ProSitePatterns Tyrosine specific protein phosphatases active site. 166 176 IPR016130 GO:0016311|GO:0016791
Lele2000087g0025 257 Gene3D Protein tyrosine phosphatase superfamily 70 220 IPR029021 -
Lele2000087g0025 257 ProSiteProfiles Dual specificity protein phosphatase domain profile. 76 225 IPR020422 GO:0006470|GO:0008138
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000087g0025 60 257 Protein tyrosine phosphatase (PTP) family AT3G02800 69.652 2.37e-99 286