Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000087g0004 ATGATTGGCCCAAACCGGGAGCAGAAGTTACAGAAGAGGAAGAAGAGGAAGGAGGAGGAAGAAGAAATGTGTGGCATATTTGCTTATCTTAACTATAACGTCAACAGGGAAAGGAGGTACGTCCTGCAGGTACTATTCAATGGCCTCAGGCGATTGGAATACCGGGGCTATGATTCCGCTGGCATCGCCATCGACTCCTCACTTTCACTCGATCCAAACACTCCTCAATGCTCGTTTTCTATCACTCCTCCTCCTCTTATCTTCCGTCAAGAGGGCAACATCGAATCCCTTGTAAAATCCGTCTACCAAGAAGTTGCTGAAGTGGAATTAAATTTGGAGGAATCTTTCTCCATCCATGCTGGAATAGCGCATACACGATGGGCAACTCACGGAGAGCCTTCTCCAAGGAATAGTCATCCTCAGAGCTCTGGCGCTGGAGATGAATTTTTGGTTGTTCACAATGGGGTTATTACTAATTACGAGGTCTTGAAGGAAACATTGATCCGGCATGGGTTCACATTTGAATCTGAAACGGACACAGAAGTCATTCCAAAACTTGCAAAACTTGTTTTCGATAAAGCAAATGAGGTAGAAGGTGACCAAGTTGTTACCTTCAGTCAAGTTGTTCTGGAAGTTATGAGGCATCTCGATGGAGCATATGCCCTTATTTTCAAAAGCCGACATTATCCAAATGAGTTAATTGCTTGCAAACGTGGCAGCCCGCTACTCCTAGGTGTTAAAGAATTGACAGAAAATATTGTTGATGGTACAGCATTTGAGGATAATAACTTTCTTTCAAAAAATGGCCACCCCAAAGAGTTGTTTTTATCTAGTGATGCTAATGCTGTGGTAGAACATACAAAGAAGGTCTTGGTTATTGAGGACGGTGAAGTTGTTCACCTCAAGGATGGTGCAGTTTCAATTTTGAAGTTTGAAAATGATAAAGGAAAAAATGGTGGTTCCCTTTCTAGACCCGCTTCAGTGCAACGGGCATTATCAGTTCTTGAGATGGAGGTTGAGCAAATTAATAAAGGACATTATGAGCATTATATGCAGAAAGAAATTCATGAGCAACCTGAATCTCTTACTACCACAATGAGGGGGAGGCTTATTCGGGGAGGATCAAGTAAATTAAAAACCGTACTGCTGGGTGGATTGAAGGATCACCTTAAAACAATCCGACGGAGTAGAAGGATTGTTTTCATCGGTTGTGGTACCAGTTACAATGCAGCTTTGGCAGCTAGACCGATATTGGAAGAACTTTCTGGAATCCCTGTTACCATGGAAATCGCTAGTGATCTGTTGGATCGGCAAGGACCAATATACAGAGAAGATACTGCTGTTTTTGTTAGTCAATCTGGTGAAACTGCAGATACTTTACTTGCACTGCAATATGCTTTAGACAATGGTGCATTATGTGTTGGCATAACAAATACCGTTGGTAGTGCGATAGCAAGGAATACACATTGTGGTGTGCATATAAATGCTGGTGCTGAGATAGGTGTGGCAAGTACCAAGGCTTACACAAGTCAAATAGTAGTGATGGCCATGTTAGCACTTGCAATTGGAGGTGACACAATTTCTAATCAAGCCAGAAGAGAAGCAATTATAGATGGTCTTTTGGACCTGCCAAATAAAGTAAGGGAGGTGCTGAAGAAAGACCAGGAGATGAAGGATCTGGCGAAGTTGTTAATGTCTGAGCAGTCTCTTCTTGTATTTGGAAGAGGATTTAACTACGCAACAGCTCTGGAGGGAGCTTTGAAAGTAAAGGAAGTAGCTCTTATGCACAGTGAAGGAATACTTGCTGGGGAAATGAAGCATGGTCCTTTGGCGTTGGTGGATGAAAATCTTCCAATTATTGTTTTAGCTACTCGTGATGCTTGCTTCAGCAAGCAGCAGTCTGTCATTCAGCAACTTCATGCTCGCAAAGGCCGTCTTATAGTTGTGTGTTCAAAAGGGGATGCTGCTTTGGTGTCTCCTGGGGAATCTTGTAGGGTAATTGAAGTTCCACCTGTTGAAGACTGTCTTCAACCTGTAATTAATATAATTCCATTACAGTTATTGGCATATCATCTAACCGTACTTAAAGGATTAAATGTTGACCAGCCTCGGAATCTCGCCAAGAGTGTAACAACCCAGTGA 2142 0.4253 MIGPNREQKLQKRKKRKEEEEEMCGIFAYLNYNVNRERRYVLQVLFNGLRRLEYRGYDSAGIAIDSSLSLDPNTPQCSFSITPPPLIFRQEGNIESLVKSVYQEVAEVELNLEESFSIHAGIAHTRWATHGEPSPRNSHPQSSGAGDEFLVVHNGVITNYEVLKETLIRHGFTFESETDTEVIPKLAKLVFDKANEVEGDQVVTFSQVVLEVMRHLDGAYALIFKSRHYPNELIACKRGSPLLLGVKELTENIVDGTAFEDNNFLSKNGHPKELFLSSDANAVVEHTKKVLVIEDGEVVHLKDGAVSILKFENDKGKNGGSLSRPASVQRALSVLEMEVEQINKGHYEHYMQKEIHEQPESLTTTMRGRLIRGGSSKLKTVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSGIPVTMEIASDLLDRQGPIYREDTAVFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISNQARREAIIDGLLDLPNKVREVLKKDQEMKDLAKLLMSEQSLLVFGRGFNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPIIVLATRDACFSKQQSVIQQLHARKGRLIVVCSKGDAALVSPGESCRVIEVPPVEDCLQPVINIIPLQLLAYHLTVLKGLNVDQPRNLAKSVTTQ 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000087g0004 713 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 24 310 IPR029055 -
Lele2000087g0004 713 CDD GFAT 24 301 - -
Lele2000087g0004 713 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 24 324 - -
Lele2000087g0004 713 Pfam SIS domain 564 695 IPR001347 GO:0097367|GO:1901135
Lele2000087g0004 713 Pfam SIS domain 393 520 IPR001347 GO:0097367|GO:1901135
Lele2000087g0004 713 CDD SIS_GlmS_GlmD_2 555 711 IPR035490 -
Lele2000087g0004 713 ProSiteProfiles SIS domain profile. 389 528 IPR001347 GO:0097367|GO:1901135
Lele2000087g0004 713 ProSiteProfiles SIS domain profile. 560 703 IPR001347 GO:0097367|GO:1901135
Lele2000087g0004 713 Pfam Glutamine amidotransferase domain 119 235 - -
Lele2000087g0004 713 SUPERFAMILY SIS domain 344 712 IPR046348 GO:0097367|GO:1901135
Lele2000087g0004 713 CDD SIS_GlmS_GlmD_1 398 523 IPR035466 -
Lele2000087g0004 713 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 24 304 IPR017932 -
Lele2000087g0004 713 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 345 567 - -
Lele2000087g0004 713 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 23 713 - -
Lele2000087g0004 713 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 24 320 IPR029055 -
Lele2000087g0004 713 Gene3D - 549 698 - -
Lele2000087g0004 713 Gene3D - 345 712 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000087g0004 122 245 PRT Gene Family AT2G16570 28.125 5.16e-06 47.8