Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1482 ATGATAGCAGGCCTCTTTCCTGGTAAAGATTCCTCACTTTGTATTTTATTCTTTTTAGATGACCAAAGAGACTCAAGATTGTCAGCTCCCGTCAAACATGAACCACCAAAGTCTGCACCGCCACCTATTGCAGTGCCAGCATTATCTTTAGAGGAGCTAAAGGAAAAGACTGACAACTTTGGGTCAAAGGCTTTGATTGGTGAAGGATCTTATGGAAGAGTGTATTATGCAACCTTAAATAATGGAAAAGCTGTTGCAGTGAAAAAGCTTGATGTTTCATCTGAAGAGGAATCAAATGTTGAGTTTTTGACCCAAGTCCAAAATGTGGCCAACAGAATGCATAGACCGATGGTGGTTCTGACCAAGCCTAGGCTTGTTTTGGGATGA 387 0.4134 MIAGLFPGKDSSLCILFFLDDQRDSRLSAPVKHEPPKSAPPPIAVPALSLEELKEKTDNFGSKALIGEGSYGRVYYATLNNGKAVAVKKLDVSSEEESNVEFLTQVQNVANRMHRPMVVLTKPRLVLG 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1482 128 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 30 120 - -
Lele19g1482 128 SUPERFAMILY Protein kinase-like (PK-like) 37 108 IPR011009 -
Lele19g1482 128 Gene3D Phosphorylase Kinase; domain 1 36 122 - -
Lele19g1482 128 ProSiteProfiles Protein kinase domain profile. 60 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1482 128 ProSitePatterns Protein kinases ATP-binding region signature. 66 89 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1482 Lele-ChrLele19 17455926 17456853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1482 38 120 Receptor kinase-like Gene Family AT4G02010 42.169 1.15e-13 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lele19g1482 ABC1 0.00037 CL0016