Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1461 ATGTCTGTGAATCGGAAGCTCTCTGGGTTAAATGGCAGGATGCCACCAAGTTCCAAGTCAGGCAAGTCAAATGAAGCTTTACATGAGTCCAATTCTTTACTTAGGAAATGCAAGAAGAAGAAGCCCTTTTTCGTGTGGGGTTTTCTTGGTGTTGTTGCAGTGGGAATTGTATGGTTCTTCATCAGTTCTCACTGTAACTTGTTGATGTTGAGCAAGGAGAAAAGGTTGGATGATTGTGAGGAGAGAGCTCGAATCTTGCTACAACGCCACAATATCAGCAAAAAGCAACTTCATGCTTTCTACCGTGTATCGCCCCAAAATGACACTCTTTTGGGAGATGCTGATTCAGACTTAGCTCCTTTACAGCGGTTGCTCTTCACGTCTATGATGCAGATTTTATCCCAATGTATCGATGAAAGAAGAGTGCAAAAGCTGTTAAGCGGTGAACCTGGCAATACCTTGCAGTCCAATTTGGTCAATAATTTGTTTCATGGGAAGATTAAGCAGTTCTTTCTTGTTCATTTTGAAACAAATGCGTTTGCATTCTATAATATAACGAACATACTTCTGGCTTTGCAGAACATTGTGCAGTCATGGAATCAGAAGCTGGTTTCACAGCCGAAAGAGTTGCAATATTCTGTTGGGCAAAATCTAAAGGGTGCTGGCATTTGGAGGATAAAGCTTTTAGTTACATTTGTGTTACTTGGAATAGTTGTGTCAATTTGGTTATTCTGGCACCTGAATAATGATATTATGCTGAGGAGAGAAGAAATGCTCGCCACTATGTGTGATAAGCGGGCTCACATGTTGCAGGATCAATTCAATGTGAGCATGAACCACGTTCATGCTCTGGCTATTCTTGTGTCCACCTTTCACCACAGTAAACATCCATATGCTATTGACCAGAAAACTTTTGGAGAATATACAGAGAGAACAGCATTTGAAATACCACTCACTAGTGGTGTTTCTTATGCTCTGAAAGTTCTCCACTCTGATAGGGAGCATTTTGAAAGGCAGCATGGGTGGATCATTAAGAAAATGGAAACTAAGAATGAAACACTTCTCCAAGATTGTATTCCCAAAAATCTCAATCCTGCACCCATTCAAGATGAATATGCACCGGTAATATTTGCTCAAGAAACTGTTTCCCATATTGTATCTATTGATATGATGTCTGGAAAGTCCATTCACTTGGGTGTTGTCCTTACATTTGCTGTCTATAATGCTAATTTTCCTCCAAATGCTACACCAGAGCAACGCATTGAAGCTACTGTTGGGTACTTGGGTGCTTCCTATGATGTTCCATCACTGGTGGATAAGCTCCTCCACCAACTTGCCAGCAAGCAAACCATTCTTGTAAATGTTTATGATACAACTAATGCTTCTGCACCTATCAATATGTACGGTAATGATGTTGTTGATACTGGGTTACTACATATAAGCAACCTGGATTTTGGTGATCCTACACGAAAACATGAGATGCATTGCAGTCGAATAGCAAAAGTGGAGGATGACTACTGTGAAATGATGGAGCTCATGGTTCGTGCCGAAGCTGTAGATATAGCCAAATCTCAGTTTCTGGCAACAGTTTCACATGAGATTAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGATACTGAACTAGATGAAAGCCAGATGGATTGTGCTCAGACTGCTCACAAGAGTGGTAAAGATCTTATATCAGTGATAAATGTGGTTCTTGTCCAGGCTAAGATTGAGGCAGGAAAGCTTGAACTTGAAGCTGTAGAATTTGATCCCCGTTCTATTCTAGATGAAGTCCTATCTCTTTTCTCTGGAAAATCTAATGAAATAGGAATTGAGTTAGTTGTTTACATATCCAAAAGGGTGCCAGAAGTTGTTATTGGCGATCCTAAACGATTCCAGCAAATAATAACTAATCTTGTTGGAAATTCACTTAAGTTCACTCATGTTAAAGGACATGTATTTGTATCGGTTCATTTGGCGAATGAAGTAAAGAGCCCACATCACATTATGGATGTAGTGCTGAGTCAAGGGTTCTGGGACATGTCAGACAGAACTGATAATACATTGAGTGGGTTTCCTGTTGTCAATAGATGGAAAAGCTGGGCAAATTTCAGAAAGTTAAGCAGTATGAATCTGATGGATGAGCCTGGAGTGATTCAATTACTTGTGACAGTCGAGGATACAGGTATAAGAATTCCTTTGGATGCACAAAACCGCATATTCACCCCTTTTATGCAAGCTGATAGTTCCACCTCACGATCATATGGTAGGACTGGAATAGGACTAAGCATTAGTAAATGTTTAGTTGACCTCGTGAGAGGAGAAATTGGATTTGTAAGCGAACCTAGAACTGGCAGTACCTTTTCTTTTAGTGAAACTTTGGGGATACCAAAAGCCTCATCCCTGGACATGGATGTTTTGGATAAAGAAAGTAGTCTATTGTATATCATCAAGAAACACAGGCATAACGACATCAAAAGAGACCCAAAAAGTTTTCCCAAGATTTTTCTCTTGGCTAACAACCGCAGTCCTAATGAACGTGGTGAGCTAAAATCTGTTGGTGTTGTAGATGATATACTAATTAAACCTCTTTGGTTTAGCGCTTTGATTCGCTTCTACAGAGAAGCCCTTGGAAGTGAGAAGAAGCAAATAATTAGAAAGAAAGAACCAAACCTTGGGAACTTGCTAAGAAAAAAACATATTTTAGTGGTTGACGATAATGCAATGAACAGAAAAGTAGTAGAAGGTGTGCTACGAAGATATGGGGCAAAAGTAACCTGTGTGGAGGGCAGCAAGGCTGTCTTAAAGATACTTAAGCCACCGCATAGTTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGACGGATTTGAAGTGACCAGACAAATCCGCTGTCTGGAGAAAGAGTTAAATGAAAAAATTGCATGTGGTGAAGCATCAAAAGAGATGTTTGGTAATGTGTCTCATCGGCACATGTCGATATTGGCTATGACAACTGATGTAACTCAAGCTTCAATCGAAGACTGCAATAGGTGTGGGATGGATGACTACATGTCAAAGCCATTCGAAGAAGAACAGCTCTATAAGGCAGTGGCGCATTGCTTTGGGTCTGGTTGA 3144 0.403 MSVNRKLSGLNGRMPPSSKSGKSNEALHESNSLLRKCKKKKPFFVWGFLGVVAVGIVWFFISSHCNLLMLSKEKRLDDCEERARILLQRHNISKKQLHAFYRVSPQNDTLLGDADSDLAPLQRLLFTSMMQILSQCIDERRVQKLLSGEPGNTLQSNLVNNLFHGKIKQFFLVHFETNAFAFYNITNILLALQNIVQSWNQKLVSQPKELQYSVGQNLKGAGIWRIKLLVTFVLLGIVVSIWLFWHLNNDIMLRREEMLATMCDKRAHMLQDQFNVSMNHVHALAILVSTFHHSKHPYAIDQKTFGEYTERTAFEIPLTSGVSYALKVLHSDREHFERQHGWIIKKMETKNETLLQDCIPKNLNPAPIQDEYAPVIFAQETVSHIVSIDMMSGKSIHLGVVLTFAVYNANFPPNATPEQRIEATVGYLGASYDVPSLVDKLLHQLASKQTILVNVYDTTNASAPINMYGNDVVDTGLLHISNLDFGDPTRKHEMHCSRIAKVEDDYCEMMELMVRAEAVDIAKSQFLATVSHEIRTPMNGVLGMLQMLMDTELDESQMDCAQTAHKSGKDLISVINVVLVQAKIEAGKLELEAVEFDPRSILDEVLSLFSGKSNEIGIELVVYISKRVPEVVIGDPKRFQQIITNLVGNSLKFTHVKGHVFVSVHLANEVKSPHHIMDVVLSQGFWDMSDRTDNTLSGFPVVNRWKSWANFRKLSSMNLMDEPGVIQLLVTVEDTGIRIPLDAQNRIFTPFMQADSSTSRSYGRTGIGLSISKCLVDLVRGEIGFVSEPRTGSTFSFSETLGIPKASSLDMDVLDKESSLLYIIKKHRHNDIKRDPKSFPKIFLLANNRSPNERGELKSVGVVDDILIKPLWFSALIRFYREALGSEKKQIIRKKEPNLGNLLRKKHILVVDDNAMNRKVVEGVLRRYGAKVTCVEGSKAVLKILKPPHSFDACFMDLQMPEMDGFEVTRQIRCLEKELNEKIACGEASKEMFGNVSHRHMSILAMTTDVTQASIEDCNRCGMDDYMSKPFEEEQLYKAVAHCFGSG 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1461 1047 Gene3D - 511 587 - -
Lele19g1461 1047 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 634 797 IPR003594 -
Lele19g1461 1047 Pfam CHASE domain 300 395 IPR006189 -
Lele19g1461 1047 Pfam CHASE domain 397 468 IPR006189 -
Lele19g1461 1047 Gene3D - 247 299 - -
Lele19g1461 1047 Gene3D CHASE domain 396 501 IPR042240 -
Lele19g1461 1047 Gene3D CHASE domain 300 395 IPR042240 -
Lele19g1461 1047 PANTHER TWO-COMPONENT HISTIDINE KINASE 214 1038 - -
Lele19g1461 1047 Gene3D - 588 803 IPR036890 -
Lele19g1461 1047 CDD HisKA 522 583 IPR003661 GO:0000155|GO:0007165
Lele19g1461 1047 Gene3D - 901 1046 - -
Lele19g1461 1047 PRINTS Bacterial sensor protein C-terminal signature 763 781 IPR004358 GO:0016310|GO:0016772
Lele19g1461 1047 PRINTS Bacterial sensor protein C-terminal signature 787 800 IPR004358 GO:0016310|GO:0016772
Lele19g1461 1047 PRINTS Bacterial sensor protein C-terminal signature 728 742 IPR004358 GO:0016310|GO:0016772
Lele19g1461 1047 PRINTS Bacterial sensor protein C-terminal signature 746 756 IPR004358 GO:0016310|GO:0016772
Lele19g1461 1047 SMART CHASE_2 299 470 IPR006189 -
Lele19g1461 1047 Coils Coil 69 89 - -
Lele19g1461 1047 SMART REC_2 906 1040 IPR001789 GO:0000160
Lele19g1461 1047 ProSiteProfiles Response regulatory domain profile. 907 1044 IPR001789 GO:0000160
Lele19g1461 1047 SMART HisKA_10 522 587 IPR003661 GO:0000155|GO:0007165
Lele19g1461 1047 SUPERFAMILY CheY-like 904 1043 IPR011006 -
Lele19g1461 1047 CDD HATPase_EvgS-ArcB-TorS-like 639 797 - -
Lele19g1461 1047 SMART HKATPase_4 634 801 IPR003594 -
Lele19g1461 1047 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 509 588 IPR036097 GO:0000155|GO:0007165
Lele19g1461 1047 FunFam Histidine kinase 4 494 585 - -
Lele19g1461 1047 Pfam His Kinase A (phospho-acceptor) domain 522 587 IPR003661 GO:0000155|GO:0007165
Lele19g1461 1047 CDD REC_hyHK_CKI1_RcsC-like 908 1040 - -
Lele19g1461 1047 Pfam Response regulator receiver domain 908 1040 IPR001789 GO:0000160
Lele19g1461 1047 ProSiteProfiles CHASE domain profile. 296 495 IPR006189 -
Lele19g1461 1047 ProSiteProfiles Histidine kinase domain profile. 529 803 IPR005467 -
Lele19g1461 1047 MobiDBLite consensus disorder prediction 1 26 - -
Lele19g1461 1047 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 579 797 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1461 Lele-ChrLele19 14117389 14126521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1461 207 1044 Miscellaneous Gene Families AT5G35750 54.158 0.0 983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele19g1461 HATPase_c 5.6e-27 CL0025