Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1450 ATGGCTTCTCTTCTACCATTTCAGGATCTCAATTGCTTCCCAAACCCTCACACTCCTATCAGTAACGCCACCGATCACATCAATGTCGGACCAACTTCCTCCTCCCAAACCTGCATTCCAATATTGGTGCCTAAGCCCGAACCTTTGGACCATTTTTTGGAACCCCAGCAGCAAGAGAAACCCTACGAAACCATCATTTTCACTCCTCCTAACCCTGAGAATGCATCGTCTGGTGGCAAGCCTGATTGTGTTGGAATCCCACAAGGCGTGCCCATTGAAGACCATGTGTATTCAGAGTTCAGTCGAATTTCTCAAATGTTTTGGGAAGCATTTCCCGACAATGCACAACAATCCAGAGGTGGCAGCATTCCAAACCCAGATTCCGGGGCTATTGTTCCTGTACCAAAGGAGAACACGAAGGTTTATTCGGTGGTGGTTGCTACTCGGAAGCGAACCTCTCAGCGCGTGAAGGAGCTGGTAAGGGTTGGTGATATTACGATTGAGGACGAAAGGCATAATCGTGCCACTGTCAGAAGGACCAGGATGGTCTATGATTCCTTGCGCGTTTTGACATCAATGGAGGAGAAGAAAAGTAGTGATGATTCGGCTAAACGTAAGCGGCCTCGAGGTGATACGCGTGCTGCCTCCTTGTTGAGATACCGTGGGATGTGGCTTAATCGAGATAAGCGGATAGTGGGTGCTATTCCAGGCATTAATGTTGGTGATTTATTCCTTTATAGGATGGAACTGTTAGTAGTTGGCTTGCACTGTCAAACTCAAGCGGGGATTGATTATCTTCCTGCAAGCATGAGTCCAAATAGGGAGCCAATAGCAACTAGTGTTATTGTGTCAGGTGGATATGAGGATGATATAGATGATGGTGACGTCATAATCTATACAGGACATGGAGGGCAAGATGCTAAACATTCAAAGCAAGTTGCTCATCAGAAGTTGGAAGGAGGAAACCTTGCATTGGAAAGAAGCATGCGGTATGGGGTTGAAGTACGGGTTATTCGAGGGATTAAATATGAGGGAAGTGCTTCAAGTTCAAACAAGGTTTATGTGTATGATGGCTTGTACCAAATTGCTGCTTGCTGGTTTGAATTGGGTAAGTCTGGTTTTGGAGTTTACAAGTATAAGCTTTTGAGAATTGATGGGCAAGAAAAACTGGGTAGTGCACTTCTTAAACATGCTCGGCTTCTTAAGGCTGATCCACTTCTGTCTGATTCTATGTGTTGTTTTAGTCTTGATATTTCGCTCAACAAGGAGAGTGCTCCCATTCGTCTCTTCAATGACGTTGATGCTGATGATGGTCCTCTACGTTTTGAGTATCTTACCAAGACAAGTTTTCCTCATTTTGTATTTCATCAGAGTGGAAGTGCTACTGGTTGTGAGTGTGTGGGAGGTTGTGCTGATGACTGTTTTTGTGCTTTGAAAAATGGAGATGGATTTCCTTATAATAGAAGTGGGATTCTGTTGAAAGGGAAGCCAGTAATTTTTGAATGTGGTCCATTCTGCCAATGTCCTCCAAATTGTCGAAATCGTGTGACACAAAAAGGGTTGAAAGTTAGATTGGAAGTATTTAGGTCTAGGGAAACAGGTTGGGGAGTTAGGTCCCTGGATGTTATTCATGCTGGTACTTTTATCTGTGCATATACAGGGGTTGTAGTGACAAAGGGGCAAGCACAAATTTTGTCTATGAACGGTGATGGAATGGTATATCCAAGTCGGTTTCCTGATAGGTGGGCAGAATGGGGGGATATATCTCAGATATACTCTAATTATGTGCGTCCATCGTATCCATCAACTCCTCCATTAGATTTTGCCTTGGATGTGTCAACAATGAGGAATGTTGCTTGCTATATCAGGCACAGTACAACTCCAAATGTGTTTGTTCAGTTTGTTCTCTATGATCACAATAACTTGATGTTTCCTCACCTTATGCTTTTTGCAATGGAGACCATCCCTCCATTGAGGGAGCTCAGTCTGGATTATGGAGTGGCTGATGATTGTACAGGCAAGCTCTTAATATGTAACTGA 2040 0.4387 MASLLPFQDLNCFPNPHTPISNATDHINVGPTSSSQTCIPILVPKPEPLDHFLEPQQQEKPYETIIFTPPNPENASSGGKPDCVGIPQGVPIEDHVYSEFSRISQMFWEAFPDNAQQSRGGSIPNPDSGAIVPVPKENTKVYSVVVATRKRTSQRVKELVRVGDITIEDERHNRATVRRTRMVYDSLRVLTSMEEKKSSDDSAKRKRPRGDTRAASLLRYRGMWLNRDKRIVGAIPGINVGDLFLYRMELLVVGLHCQTQAGIDYLPASMSPNREPIATSVIVSGGYEDDIDDGDVIIYTGHGGQDAKHSKQVAHQKLEGGNLALERSMRYGVEVRVIRGIKYEGSASSSNKVYVYDGLYQIAACWFELGKSGFGVYKYKLLRIDGQEKLGSALLKHARLLKADPLLSDSMCCFSLDISLNKESAPIRLFNDVDADDGPLRFEYLTKTSFPHFVFHQSGSATGCECVGGCADDCFCALKNGDGFPYNRSGILLKGKPVIFECGPFCQCPPNCRNRVTQKGLKVRLEVFRSRETGWGVRSLDVIHAGTFICAYTGVVVTKGQAQILSMNGDGMVYPSRFPDRWAEWGDISQIYSNYVRPSYPSTPPLDFALDVSTMRNVACYIRHSTTPNVFVQFVLYDHNNLMFPHLMLFAMETIPPLRELSLDYGVADDCTGKLLICN 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1450 679 ProSiteProfiles YDG domain profile. 233 383 IPR003105 -
Lele19g1450 679 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 136 667 - -
Lele19g1450 679 SUPERFAMILY PUA domain-like 214 396 IPR015947 -
Lele19g1450 679 ProSiteProfiles SET domain profile. 523 666 IPR001214 GO:0005515
Lele19g1450 679 Pfam SET domain 534 666 IPR001214 GO:0005515
Lele19g1450 679 Gene3D - 230 392 IPR036987 -
Lele19g1450 679 SMART preset_2 415 507 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele19g1450 679 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 86 679 IPR025794 GO:0016571
Lele19g1450 679 SMART set_7 523 672 IPR001214 GO:0005515
Lele19g1450 679 ProSiteProfiles Pre-SET domain profile. 462 520 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele19g1450 679 SUPERFAMILY SET domain 411 667 IPR046341 -
Lele19g1450 679 Pfam Pre-SET motif 419 515 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele19g1450 679 SMART G9a_1 228 387 IPR003105 -
Lele19g1450 679 Pfam SAD/SRA domain 232 387 IPR003105 -
Lele19g1450 679 Gene3D SET domain 393 679 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1450 Lele-ChrLele19 13276948 13278987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1450 149 668 Su(var)3-9 homologs AT5G04940 40.228 8.23e-112 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele19g1450 SAD_SRA 1.4e-48 CL0178