Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1439 ATGGCTTTGCCAGAATGCTCGGCGCCACAACTGGCCCAATTATTTGGCGCCAACACAACCAATGCCGGCGCCGCCGCTAACTTCATCTGTGACAGATTCACCGCTGTCACCAACAAGTTCTCCGACACCGCCTTCGCCGTTGACAGCACCTATCTCCTCAACTCTGCTTACCTAGTTTTCGCCATGCAACTTGGCTTCGCCATGCTCTGCGCCGGCTCAGTTCGCGCCAAGAACAGTATGAACATCATGCTTACCAACGTCCTCGACGCCGCCACAGGTGGTCTCTTCTACTACCTCTTTGGTTTCGCTTTTGCCTTCGGAACTCCCTCCAATGGTTTCATCGGCCGCCACTTCTTTGGTCTTAAAGATATCCCAGATACAAACTTTGACTACAGCTACTTCCTGTATCAGTGGGCTTTCGCCATCGCTGCCGCCGGAATTACCAGCGGCTCCATCGCTGAGAGAACTCAGTTCGTGGCGTATCTCATCTACTCATCGTTCTTAACAGGCTTTGTTTATCCCGTCGTCTCTCACTGGTTCTGGTCCGGTGACGGTTGGGCAAGTCCGACCAACTCATCCAACTTACTTTTTGGTACCGGAGTGATAGATTTCGCCGGCTCCGGTGTGGTCCACCTCGTCGGTGGTATCGCTGGTCTCTGGGGTGCTTTCATCGAAGGTCCCAGAATTGGCAGATTCGATCATACGGGTCGACCCATAGCTCTTCGTGGACACAGTGCTACTCTCGTCGTTCTCGGAACTTTCTTGCTCTGGTTTGGATGGTACGGATTCAATCCAGGTTCCTTCACAAAGATTCTCAACGCTTACGAATCCGGCAATTACTACGGCCAGTGGAGTGCGGTGGGTCGAACCGCCGTGACAACCACACTAGCTGGTTGCTCCGCAGCATTAACCACTCTCTTTGGCAAGCGGATCCTCTCCGGCCACTGGAACGTGACAGACGTCTGCAATGGTTTGCTCGGTGGATTCGCTGCCATCACCGCCGGGTGCTCCGTCGTGGAGCCATGGGCCGCGATTATTTGTGGGGTCGTGGCAGCGGTGGTTTTGATCAGTTGCAACAAGCTGGCGGAGAAAATAAGGTTCGACGACCCACTGGAGGCGGCGCAACTGCACGGCGGCTGCGGCGCGTGGGGGATAATCTTCACGGCGTTGTTCGCAAAGGGGGAGTATGTGGATCAGGTGTACCCGGGTAAAGCGGGTCGGCCACACGGGTTGTTCATGGGTGGTGGAGGGAAGCTATTAGGCGCTCACGTGATCCAGATCCTGGTAATAGTCGGGTGGGTCAGCGCCACCATGGGTACACTGTTCTTCATTCTTCATAAGCTAAAACTATTACGGATCTCAGCAGAGGACGAGTTAGCGGGTATGGATTTGACCCGACACGGAGGATTTGCTTACGTGTATGAAGATGATTCACATAAACATGGGATTCAATTGAAAAAAATCGAACCGAATGCCACCGCTCCGTCACCCCCAATAGAATTGTAA 1506 0.5372 MALPECSAPQLAQLFGANTTNAGAAANFICDRFTAVTNKFSDTAFAVDSTYLLNSAYLVFAMQLGFAMLCAGSVRAKNSMNIMLTNVLDAATGGLFYYLFGFAFAFGTPSNGFIGRHFFGLKDIPDTNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSGDGWASPTNSSNLLFGTGVIDFAGSGVVHLVGGIAGLWGAFIEGPRIGRFDHTGRPIALRGHSATLVVLGTFLLWFGWYGFNPGSFTKILNAYESGNYYGQWSAVGRTAVTTTLAGCSAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIICGVVAAVVLISCNKLAEKIRFDDPLEAAQLHGGCGAWGIIFTALFAKGEYVDQVYPGKAGRPHGLFMGGGGKLLGAHVIQILVIVGWVSATMGTLFFILHKLKLLRISAEDELAGMDLTRHGGFAYVYEDDSHKHGIQLKKIEPNATAPSPPIEL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1439 501 FunFam Ammonium transporter 29 487 - -
Lele19g1439 501 Pfam Ammonium Transporter Family 52 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lele19g1439 501 SUPERFAMILY Ammonium transporter 47 453 - -
Lele19g1439 501 Gene3D Ammonium transporter AmtB like domains 28 492 IPR029020 -
Lele19g1439 501 PANTHER AMMONIUM TRANSPORTER 29 468 - -
Lele19g1439 501 TIGRFAM amt: ammonium transporter 48 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lele19g1439 501 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1439 Lele-ChrLele19 12503868 12505373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1439 5 496 Inorganic Solute Cotransporters AT4G13510 80.162 0.0 808