Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1433 ATGGCAGCCTTGTTTCTTCAAATCAGTATAATGAGCCAGGCTCTAATTTTTGCAACCCGTTCTCGCAGTTGGTCTTTTGAACACCCTGGATTACGATTAGTGACTGCTTTCATTATTTCTCAACTGATTGCAACATTAATTGCAGTATATGCTTACTACTGGGGCTTTGCAAGGATTAATGGTGTTGGTTGGGGTTGGGCTATGGCTATTTGGCTATACAATATTATCTTCTATGTTCCACTTGACTTAATGAAGTTTACTATCCATTACATCTTAAGTGGCAAGGCTAGAGAAAACAAGAAAAGATATATGGACCAAAGGAGCAAACTGGAACAAGTGGCAAAACTGGATAGTGCAGACACAGAGTTTCTAACATACAAGATGGATAAGTTTCTGAATGATATGAGTAGAGAGAAGCCAATCAGGTTCACCTCCCAACACTTGATGCTTGCAACTTACAACTACTCCTACAAGCTCGGGTCAGGAGGTTTCGGATCTGTTTATAAAGGGGTTTTTACCGATGGAACCACCGTGGCTGTGAAAGTTCTAAATCAGACCTCTAATGAGAGAATAGAGGAGCAATTCATGGCAGAAGTAGGCACAACTGGAAGAGTTCATCATTTAAATCTAGTTCGCCTCATCGGGTTTTGCATCGAAAAGAATATGAGAGCTCTTGTTTATGAGTATATGATCAATGGCTCTCTTGACAAGTATCTTTTTTATGAAAAAGAGACCTTAGAATTTGAAAAGCTTCATGAGATTGCAATTGGAACAGCAAGAGGAATTGCTTACTTGCATGAAGAATGCCAACAAAGAATCATCCATTATGACATAAAACCACAAAACATACTTTTGGACCATAACTTTTGCCCTAAAGTTGCTGATTTTGGGTTGGCCAAGCTTTGTAACAGGGAAAAATCCCATATCACCATGACAGGACTAAGAGGAACTCCTGGTTATGCTGCACCAGAACTTTGGATGCCATTTCCCGTGACTCACAAGTGCGATGTTTATAGCTTCGGAATGTTGCTATTCGAGATCATAGGAAGGAGAAAGAACCTCGATACGAACCTTACCGAAAGTCAAGAGTGGTTCCCGAGATGGGTTTGGATAAAGTTCGACAGTAAAAAACTTGATGAGTTGACTACAGATTGTGGTATAGCAGATAAAGATAAAGGGATAGTAGAAAGAATAGCAAAGGTAGCTCTTTCGTGTGTTCAATATAGACCAGAATTGAGACCCACAATGAGTGATGTGGCCAAAATGTTGGAGGGTTTGATGGATATTCCATACCCTTTGAACCCTTTTCAACACATGATAGATCAAGGTCAACCTATTGATACACAACGAAGTGATACTGTTATTGATTTTAGTTCTTCTCTTGAAGTAACCAAATCAGCCATTGATCATTCTAGGCCTATCACAAGAATGCATGAGATCGAAATAGACATGAGTTAA 1458 0.3951 MAALFLQISIMSQALIFATRSRSWSFEHPGLRLVTAFIISQLIATLIAVYAYYWGFARINGVGWGWAMAIWLYNIIFYVPLDLMKFTIHYILSGKARENKKRYMDQRSKLEQVAKLDSADTEFLTYKMDKFLNDMSREKPIRFTSQHLMLATYNYSYKLGSGGFGSVYKGVFTDGTTVAVKVLNQTSNERIEEQFMAEVGTTGRVHHLNLVRLIGFCIEKNMRALVYEYMINGSLDKYLFYEKETLEFEKLHEIAIGTARGIAYLHEECQQRIIHYDIKPQNILLDHNFCPKVADFGLAKLCNREKSHITMTGLRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRKNLDTNLTESQEWFPRWVWIKFDSKKLDELTTDCGIADKDKGIVERIAKVALSCVQYRPELRPTMSDVAKMLEGLMDIPYPLNPFQHMIDQGQPIDTQRSDTVIDFSSSLEVTKSAIDHSRPITRMHEIEIDMS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1433 485 Gene3D - 1 91 - -
Lele19g1433 485 CDD STKc_IRAK 159 426 - -
Lele19g1433 485 PANTHER OS07G0415500 PROTEIN 115 435 - -
Lele19g1433 485 FunFam serine/threonine-protein kinase PBS1-like 124 229 - -
Lele19g1433 485 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 92 IPR023298 -
Lele19g1433 485 Pfam Protein tyrosine and serine/threonine kinase 157 423 IPR001245 GO:0004672|GO:0006468
Lele19g1433 485 ProSitePatterns Protein kinases ATP-binding region signature. 159 181 IPR017441 GO:0005524
Lele19g1433 485 SMART serkin_6 153 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1433 485 Gene3D Phosphorylase Kinase; domain 1 127 229 - -
Lele19g1433 485 Gene3D Transferase(Phosphotransferase) domain 1 230 430 - -
Lele19g1433 485 ProSiteProfiles Protein kinase domain profile. 153 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1433 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Lele19g1433 485 FunFam PR5-like receptor kinase 230 430 - -
Lele19g1433 485 SUPERFAMILY Protein kinase-like (PK-like) 143 451 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1433 Lele-ChrLele19 12436690 12438737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1433 142 457 Receptor kinase-like Gene Family AT5G38280 42.462 1.15e-80 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Lele19g1433 PK_Tyr_Ser-Thr 3.5e-49 CL0016