Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1432 ATGGCTGATGGAAGTTGGCATAGGGCAAGCAAAGGTGCTCCCGAGCAGATCTTGGCCTTGTGCAACGTTAGGGCAGATGAGAAGAAGAAGGTCCATGCTATCCTTAAATTGTTTGCAGATAGAGGGCTTCGTTCGCTTGCTGTTGCTAGACAGGAAGTTCCTGAGAAAACCACAGAAAGTTCCGGTGGTCCATGGCAATTTTATGGCTTGTTGCCACTATTTGATCCCATTAGGCATGATAGCGCTGAGACCATTCAAGGAATTCTTAATCTTGGTGTAAATGTCAAGATGATTACTGGCGATCAACTTGCCATAGCTAAGGAGATTGGTGGGAGACTCGGGATGGGAACAAATATGTGTCCATTTGCTTCTTTGCTTGGTGAAGACATAGATGAAAATATCGATGCACTTCCTGTAGAAGGGCTGATCGAGAAGGTTGATGGATTTGCTGGACTATTTCCTGAGCACAAATATGAAATTGTGAAGAAGTTACAAGAAAGGAAGCATATTTGTGGAATGATTGGAAATGGAGTCAATGATTTACCTGCCTTGAAGAAGGCCAATATTGGAATTGCCACTCCTGATGCTACTGATGCTGCAAGAAGTGCTTCTGACATTGTCCTAACAGAACCTGGATTGAGTGTTATTATTAATGCCATCTCAACAAGTAGAGATATTTTCCAAAAAATGAAAAACTACATAGTTAGTCGTTCTCTGTTATCTTCATAA 729 0.4184 MADGSWHRASKGAPEQILALCNVRADEKKKVHAILKLFADRGLRSLAVARQEVPEKTTESSGGPWQFYGLLPLFDPIRHDSAETIQGILNLGVNVKMITGDQLAIAKEIGGRLGMGTNMCPFASLLGEDIDENIDALPVEGLIEKVDGFAGLFPEHKYEIVKKLQERKHICGMIGNGVNDLPALKKANIGIATPDATDAARSASDIVLTEPGLSVIINAISTSRDIFQKMKNYIVSRSLLSS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1432 242 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 147 235 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1432 242 Gene3D - 3 74 IPR023299 GO:0000166
Lele19g1432 242 Gene3D - 75 211 IPR023214 -
Lele19g1432 242 Pfam haloacid dehalogenase-like hydrolase 68 188 - -
Lele19g1432 242 SUPERFAMILY HAD-like 66 220 IPR036412 -
Lele19g1432 242 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 2 80 IPR023299 GO:0000166
Lele19g1432 242 FunFam Membrane H(+)-ATPase1 14 74 - -
Lele19g1432 242 Gene3D - 212 237 - -
Lele19g1432 242 PRINTS H+-transporting ATPase (proton pump) signature 146 162 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1432 242 PRINTS H+-transporting ATPase (proton pump) signature 174 190 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1432 242 PRINTS H+-transporting ATPase (proton pump) signature 31 49 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1432 242 PRINTS H+-transporting ATPase (proton pump) signature 205 230 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1432 242 PRINTS P-type cation-transporting ATPase superfamily signature 91 101 - -
Lele19g1432 242 PRINTS P-type cation-transporting ATPase superfamily signature 174 193 - -
Lele19g1432 242 PRINTS P-type cation-transporting ATPase superfamily signature 69 80 - -
Lele19g1432 242 PRINTS P-type cation-transporting ATPase superfamily signature 197 209 - -
Lele19g1432 242 FunFam Plasma membrane ATPase 68 222 - -
Lele19g1432 242 PANTHER CALCIUM-TRANSPORTING ATPASE 3 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1432 Lele-ChrLele19 12431100 12432606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1432 2 235 Primary Pumps ATPases AT5G57350 74.786 6.13e-121 364