Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1417 ATGCAATTTCTGTCCTTCACTTTTAGTTTTCTTATCATTTTCAGCGGCATAATTTGCAATGCAAATGATTGTTCTAATCCTCCGAAAGTCATTAATGTTGGTAAGATTGGGCGAGGAAGGTTGAGAACAATTCAAAGGGCTATTAACTCCATCCCAATCCACAACACTCGATGGATTCATATCCGAATTGAAGCAGGAAATTATATGGAAAAAGCAACGATACCAATAAACAAACCATGCATTTTTCTTGAAGGAGCTGGAAGTTCTTCTACAGTTATTCAGTGGAAGGATCATTCAAAAACAACTCAAAGTTATACTTTTGAGTCAAATGCACCTAACGTTGTAGTCAAGGGCATTAAATTCGTGAACTTGTATAATCATCCCCCGGGGGAAGATGAAGGTGAGAGAATTGTGCCAGCACTAGCAGCAGCAGTGAGAGGAGACAAAAGTGCATTCTATGATTGTGTCTTCAAAGGGGTTCAAGACACTTTAATGGATGATACAGGTCGCCATTATTACCATAATTGCTACATTCAAGGTCAAACTGATTTCATTTTTGGAAAAGGCCAATCAATCTATGAGAATTGCACACTCTATTTTAAACCAGGGCCAGATGGTAGGAATGGTGCAATAGCAGCACAAAAGAGAGAATCCATTAATGAAACAAGTGGGTATGTGTTCAATGGATGCCACGTGGATGGAAATGGAAAAACCATCCTAGGCAGACCTTATGGGCGATATTCTAGGGTCATTTTCGCCAATTCTTATCTCTCTCGCGTGGTTGACCCTGTGGGTTGGAATGCTTGGAATCAACGTGACGTGTAA 825 0.4012 MQFLSFTFSFLIIFSGIICNANDCSNPPKVINVGKIGRGRLRTIQRAINSIPIHNTRWIHIRIEAGNYMEKATIPINKPCIFLEGAGSSSTVIQWKDHSKTTQSYTFESNAPNVVVKGIKFVNLYNHPPGEDEGERIVPALAAAVRGDKSAFYDCVFKGVQDTLMDDTGRHYYHNCYIQGQTDFIFGKGQSIYENCTLYFKPGPDGRNGAIAAQKRESINETSGYVFNGCHVDGNGKTILGRPYGRYSRVIFANSYLSRVVDPVGWNAWNQRDV 274
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1417 274 SUPERFAMILY Pectin lyase-like 27 271 IPR011050 -
Lele19g1417 274 Pfam Pectinesterase 32 271 IPR000070 GO:0030599|GO:0042545
Lele19g1417 274 Gene3D - 25 274 IPR012334 -
Lele19g1417 274 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 272 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele19g1417 Lele-ChrLele19 11951304 11955474 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1417 41 272 Carbohydrate Esterase AT2G19150 45.957 2.08e-66 206