Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1415 ATGGGAAAAAGAGTTCGTGATAAGAAACTTGATGTGGCAGAGGAGGATAATAGTAGCGGTGCTAGCACCAGTGCTAGTGCAAGTTCCAGTACTAGTCACCATGGAAGAAGTTGGAGCATTCTTAATATTATGAAGTATCATCATTGGCCACATAATGTCAAGAAAAAGCTCACACACAAGAAGAATGCTGCTGGAAAAATTCCTGAAGATATCACAACTCAAAAGCTCTTTTTTACATTAGAGCAGTTGATGGTACAGGTTGAAGAAATGTTGGCACAGTCCAATTCACCAGCAAAACATTCTGTGAAAGCCAGACTAAAAGCACTTCTTACTGATGAGATAGCCAGAAAGAAGGGTCAACATAAGAGAAGTTCAACCTACCCTGTAAAGCCAAAACCACCAAAACAAACCATTTCTATTCCCAATTTAGATCATTCAGATCCTAATCTCGTCTCCGAAAATAATCCTAACACAATGGTTCCACACTACACTACTGAGACTTTCGAGGCTCTGCCACCAACATGCTCAACAACGGCCGATCAAGAGATCTGTGTAGAGTGTGGGACCGTGTTTTCTAGTGATTCAATGGAGCATAATAATAGTATGGTTCATAAGCATCAGAAACCACCATTGGAATATCACAAAGCATTGATGAAGGAAACATTGAGCTATGAAGAGAAATCAATGCATGCCAAGTTACTCACAACTGATGTGTCACCTTGTCTCTTTAAGGATTTCTTGGATGCTCTGGATATGATAAGTTCAAATAAGGATTTGCTGTTAAAATTTCTGCAGCATCAACATTCTCCTTTGGCATGCCACTTTCCTAACCAACAGGAATCGACAACAAGAAAGATGATACTAAATAAGGCTAGTTCATTTCCTATTCCTGGCTCCTCCTCGTCATCTAAAGTTAAAGGACAAGATACAAACAAAATGGCAGATGATGAAATGCTCATATCAAGAAAGGCACAAAATGATAGTCAAATGCAAAAGCCGGTAATATCTCGGTCAAAATCTTTGGGGAAAAATGATCAGCAGCAGCCTGTTTCATTGGATTCTTCTTATTATACACTGGTACCGACCAAGGTTCGAAATCAGAGGGCGATTAAGCGTTTCAAGGATCTTAGACAGAAGGTGAAACATGTTATCAAAGAGAGCAGAAACGAGAAACGCCGCATAGCCATGGATGCTGTGTATGACAAAGTTCCTCATGGAAATGATAAACCTCCCATTGACTTGAAGAGGAAGATTCCCAAAGTTCCCATAGACACTACTATTTCACCAAGTGAATTTGGCGGTTTTGGAAAGCGTCGAATGTCTCCGATGAGGACTTCATCTTTGAATGAATCAATTTGGAAATATTCTCAGCTTTATGAGACTTGTTTTAACAAAAAATCTAGGTACCCTAAATCTGAAAGGTTAAAGTTGAAAACAACGGAGGAGAAAAATTCAATATTAAGGACCCCAAAATCCTTTCAAAGGTTTCTTTCACTACCAAATCTTAAAGATTACTTTTCTCAAAATGAGGAGGATCCTTTTATTTTACCTCCACAGGTCCCATTCAGGAAATTTGCAGAGAGAACAGCTAGTCCAAGCACTAGTGTAGGTAACATTACAACTCCAGAAAATGTTTTAAGAAGTGTTCATAAAGGAATAGCCATCATAAGTGATTCAGAGTTGGTATCAGATGATGAAGAAGACAAGGAGTCAAATCAAAATGAAAGTATAGGAATTGATGATTATTTTGGAAGATTAACAGACAGTGAAATGAATGAATCAACTTCTGCGGTTGCTGAAACAAAATCAATCTCATTTTCTGGCTCCAGCTTCCTAGATGATTCAATTAGCTCTGATGAGAAGATATCTTTACCAGAAGTTCTGGCAATAATCGTAGTTTCCCACTTCATCATCTGGTTATGTTTGAATGGAACAGATTCAAAAATAAAGCCATGGACATTAGATGGATTAGATCATCTGACAGAGCAAGTACAAGAACTTGACATTGCAGGTTACCATGAACTGGTGTTGAGTAGTGAAAATGATTTCCTGAAATTTGGAACTCTGAACAAGAACCTGAACTTGGTAATTCCTGGCCTTGAAGTGGACAATAAAAGTGCAGTTGAATTTAACTATGTGAAAGATGTTTTAGAACTATCTGGTTTATCCACAAGTCATGAATCTCTCAGCACATGGTTTTCCAATGAGCAACCAGTTGATCCAACAGTATATGATGAATTAGAAGGTTGCTTACTCTTTGATCCTCAAAGTTCTGGTAATGAAAAATCTGGTGGGGCCCATTGTAACCATTTGCTTTTGTTTGATTTGATTAATGAGGTTTTGATTGAGATTTTTGGGAGATCATATAGTTATTATCCAAAATCTTTGTCTTCTCTTTGTCATGTTTACCCAATACCAGTAGGAGACCAAGTTCTGAGAGAAGTGTGGACTCTTATTAAGTGGTATCTGAACTTGAATTCAGAGTTATATCCTTCCTTGGATTATTATGTTAGCAGAGACTTGGCAAGAAGTAATGGATGGATGAATCTTCAGTTTGATTCTGGATGTGTGGGGCTTGGGCTTGATGACTTGATTTTTGATGATCTTTTGGATGAGATTGCGTGTAATTGA 2631 0.3801 MGKRVRDKKLDVAEEDNSSGASTSASASSSTSHHGRSWSILNIMKYHHWPHNVKKKLTHKKNAAGKIPEDITTQKLFFTLEQLMVQVEEMLAQSNSPAKHSVKARLKALLTDEIARKKGQHKRSSTYPVKPKPPKQTISIPNLDHSDPNLVSENNPNTMVPHYTTETFEALPPTCSTTADQEICVECGTVFSSDSMEHNNSMVHKHQKPPLEYHKALMKETLSYEEKSMHAKLLTTDVSPCLFKDFLDALDMISSNKDLLLKFLQHQHSPLACHFPNQQESTTRKMILNKASSFPIPGSSSSSKVKGQDTNKMADDEMLISRKAQNDSQMQKPVISRSKSLGKNDQQQPVSLDSSYYTLVPTKVRNQRAIKRFKDLRQKVKHVIKESRNEKRRIAMDAVYDKVPHGNDKPPIDLKRKIPKVPIDTTISPSEFGGFGKRRMSPMRTSSLNESIWKYSQLYETCFNKKSRYPKSERLKLKTTEEKNSILRTPKSFQRFLSLPNLKDYFSQNEEDPFILPPQVPFRKFAERTASPSTSVGNITTPENVLRSVHKGIAIISDSELVSDDEEDKESNQNESIGIDDYFGRLTDSEMNESTSAVAETKSISFSGSSFLDDSISSDEKISLPEVLAIIVVSHFIIWLCLNGTDSKIKPWTLDGLDHLTEQVQELDIAGYHELVLSSENDFLKFGTLNKNLNLVIPGLEVDNKSAVEFNYVKDVLELSGLSTSHESLSTWFSNEQPVDPTVYDELEGCLLFDPQSSGNEKSGGAHCNHLLLFDLINEVLIEIFGRSYSYYPKSLSSLCHVYPIPVGDQVLREVWTLIKWYLNLNSELYPSLDYYVSRDLARSNGWMNLQFDSGCVGLGLDDLIFDDLLDEIACN 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1415 876 Coils Coil 366 386 - -
Lele19g1415 876 Pfam Protein of unknown function (DUF3741) 226 268 IPR022212 -
Lele19g1415 876 ProSiteProfiles Zinc finger C2H2 type domain profile. 182 209 IPR013087 -
Lele19g1415 876 PANTHER PROTEIN TRM32 24 875 IPR044257 -
Lele19g1415 876 MobiDBLite consensus disorder prediction 1 34 - -
Lele19g1415 876 MobiDBLite consensus disorder prediction 117 149 - -
Lele19g1415 876 MobiDBLite consensus disorder prediction 16 34 - -
Lele19g1415 876 MobiDBLite consensus disorder prediction 322 349 - -
Lele19g1415 876 MobiDBLite consensus disorder prediction 323 349 - -
Lele19g1415 876 MobiDBLite consensus disorder prediction 1 15 - -
Lele19g1415 876 Pfam Domain of unknown function (DUF4378) 709 872 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1415 Lele-ChrLele19 11888521 11894262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1415 700 866 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 55.233 7.27e-53 196