Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1341 ATGGCTGCCGCCGAGCCATTCTCCTCTGGAATGAGCTTCTACGAGCTTCTCGGTATACCCGAATCCGGATCCTTACCCGAAATCAAGAACGCCTACAGGCAGCTCGCCCGCAAGTACCACCCGGATGTGTCGCCGCTGGATCGGGTTAACGAGTTCACCAAGATGTTCATTCGACTCCGTGAAGCCTATGAGACCTTATCGGATCCTGGACGGAGAGCTCTCTACGACAGAGGGCTTCACTTGGGCTACTCTAAGGGCGTAAGCTCCTACGACGATCAGATGAGGGAAATAAAGAAAGGATGGAGAGTGATTTGGGAGGCTCAGTTATCGGAGCTGATAAACAGAACCTACAAGTATGGCGATAGAAGTGAGTCATGGGCCGCTCAAATCCGCCGCAACAGGAATGAAACGTTCACTGAGGTTTACAATTAG 432 0.5185 MAAAEPFSSGMSFYELLGIPESGSLPEIKNAYRQLARKYHPDVSPLDRVNEFTKMFIRLREAYETLSDPGRRALYDRGLHLGYSKGVSSYDDQMREIKKGWRVIWEAQLSELINRTYKYGDRSESWAAQIRRNRNETFTEVYN 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1341 143 ProSiteProfiles dnaJ domain profile. 12 79 IPR001623 -
Lele19g1341 143 CDD DnaJ 13 68 IPR001623 -
Lele19g1341 143 Pfam DnaJ domain 13 76 IPR001623 -
Lele19g1341 143 SMART dnaj_3 11 71 IPR001623 -
Lele19g1341 143 Gene3D DnaJ domain 2 103 IPR036869 -
Lele19g1341 143 PRINTS DnaJ domain signature 32 47 IPR001623 -
Lele19g1341 143 PRINTS DnaJ domain signature 14 32 IPR001623 -
Lele19g1341 143 PRINTS DnaJ domain signature 71 90 IPR001623 -
Lele19g1341 143 PRINTS DnaJ domain signature 51 71 IPR001623 -
Lele19g1341 143 SUPERFAMILY Chaperone J-domain 10 89 IPR036869 -
Lele19g1341 143 ProSitePatterns Nt-dnaJ domain signature. 56 75 IPR018253 -
Lele19g1341 143 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 6 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1341 Lele-ChrLele19 9940720 9941879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1341 3 76 C2H2 Transcription Factor Family AT1G74250 42.308 3.57e-09 52.0