Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1326 ATGGCATCGGATTCGAATGGACCTGCATCCGGTAACACCCTTAAGTCTATCTGTTACAAGCGTGGTTCGCTTCAGCTTCTTGATCAGAGAAAGCTCCCTCTAGAAAGCGTTTACTTGGACATTCTGAATTCAACAGATGGCTGGAATGCCATAAAGGATATGGTGGTCCGTGGAGCACCTGCTATTGCTATCGCAGCAGCACTTTCTTTGGCTGTTGAAGTTTTCATTCTAGAGGCATTTCATGGGTCACCTGGTGATGCAGCTTCCTTTCTTGGAGAGAAATTAGATTATCTTGTCTCAAGTCGGCCAACTGCAGTCAACCTTTCAGATGCTGTAACCAAACTCAAAGAAGTTATATCTAAGGCTGTTGCATCTACTACAGAGGCCAAGAGTGTTTTTCAGGCGTATATAGAAGCTGCTGAGATTATGCTTGAGGATGATGTTGCCTCAAATAGAGCAATTGGTTCTTATGGAGCTAGTATTATTCAACAACAGACGGGGAAAAGAAAGCTTTCTGTTTTGACCCATTGCAACACTGGAAGTCTGGCCACTGCTGGTTATGGTACTGCTCTGGGTGTAATTCGTGCACTTCATAGTGAAGGGGTTTTAGAAAGGGCCTATTGCACAGAAACACGCCCATTCAATCAGGGATCTAGGCTCACGGCCTATGAGTTGGTGCATGAATGCATACCTGGAACTCTTATAGCAGATTCTGCGGCAGCTGCACTGATGAAAGCTGGACAAGTAGATGCTGTTGTTGTTGGGGCAGACCGTGTTGCATCAAATGGTGACACAGCCAACAAAATTGGAACATATAGTGTTGCCTTATGCGCCAAGTTTCATAATGTACCCTTTTATGTGGCTGCCCCCTTGACTTCCATTGATCTTACACTTTCTTCTGGACAAGAAATTGTCATCGAGGAGAGATCTCCCAAGGAATTGTTGAATGCACGTGGAGGACTTGGAGAGCCCGTTGCAGCCCCAGGAATTTCTGTGTGGAACCCTGCTTTTGATGTCACACCGGCTGGTCTGATTTCCGGTATCATCACAGAGAAGGGTGTCATTACCAAGACAAGTGATGACGCATTCGACATAAAAGCTTTCGCACAGAAGACAGGTTATGCCAACAGTTGA 1134 0.4559 MASDSNGPASGNTLKSICYKRGSLQLLDQRKLPLESVYLDILNSTDGWNAIKDMVVRGAPAIAIAAALSLAVEVFILEAFHGSPGDAASFLGEKLDYLVSSRPTAVNLSDAVTKLKEVISKAVASTTEAKSVFQAYIEAAEIMLEDDVASNRAIGSYGASIIQQQTGKRKLSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCTETRPFNQGSRLTAYELVHECIPGTLIADSAAAALMKAGQVDAVVVGADRVASNGDTANKIGTYSVALCAKFHNVPFYVAAPLTSIDLTLSSGQEIVIEERSPKELLNARGGLGEPVAAPGISVWNPAFDVTPAGLISGIITEKGVITKTSDDAFDIKAFAQKTGYANS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1326 377 Gene3D - 12 203 IPR027363 -
Lele19g1326 377 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 14 366 IPR005251 -
Lele19g1326 377 Pfam Initiation factor 2 subunit family 56 356 IPR000649 GO:0044237
Lele19g1326 377 FunFam Methylthioribose-1-phosphate isomerase 169 366 - -
Lele19g1326 377 Gene3D - 204 369 IPR042529 -
Lele19g1326 377 TIGRFAM eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 44 357 IPR011559 GO:0044249
Lele19g1326 377 FunFam Methylthioribose-1-phosphate isomerase 12 203 - -
Lele19g1326 377 TIGRFAM salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 15 357 IPR005251 -
Lele19g1326 377 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 12 370 - -
Lele19g1326 377 SUPERFAMILY NagB/RpiA/CoA transferase-like 12 359 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1326 Lele-ChrLele19 9682676 9686856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1326 53 371 Eukaryotic Initiation Factors Gene Family AT2G05830 78.125 9.75e-175 488