Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1323 ATGTACAAGAGGAACAATATTTCATCTACTTTGCAAAATCAAAACATGAAGACTAAGAAACAAAAGTTTGAAGATAGTAATCTCCCAAACAACAATATTAATGATTTCTGGCAAATTATTCCAAGTGGGTTTAAGTTTTTACCAACAGAACAAGAGTTGATTATGGCATATCTGAGGAAGAAAGTGATAAATGAACCATTAGAACCTAATCTAATTGCTGAAGCTGAGATCTATAAGTACAATCCTGAACAACTATCTAGCAATCATCATAAGAGCAAGAAGACCAATTGGATCATGCGTGAGTATTATTTGGATGGAACTACTCATAGCAGGACAAGTCCCGCAGATATGAAGTTAGATGATTGGGTTCTGTGTAAGATTTACAAGAACAATAAGAACTACATGAAGAGCTCTACAAAGGAGGAAGCATACTTAGAACCAATAAGAATAGAGCCAATTCAAATGATTTATTCTTCAAAAATATTGCCTCAACTTCAACCTGAGCCTGAAAGTCACAATATGGATCCAGTTCAGTTGAACCCTCATGCATCATCAGGAATATCTCATAATGCTTCTTCCAATCCTCCATATTTTAATGAAATAAAAAATGAAATGTCAAGTTTAGATGACGTTTGGAATTCAATAGATCTTGACAACTACTTGGATATGGGAAATAATGATTATATGATCCCAAAAACATACATGCTTTCTTCAGTGGAGGATGTAAGTGGCATGCATCAGTCAAATTAA 750 0.34 MYKRNNISSTLQNQNMKTKKQKFEDSNLPNNNINDFWQIIPSGFKFLPTEQELIMAYLRKKVINEPLEPNLIAEAEIYKYNPEQLSSNHHKSKKTNWIMREYYLDGTTHSRTSPADMKLDDWVLCKIYKNNKNYMKSSTKEEAYLEPIRIEPIQMIYSSKILPQLQPEPESHNMDPVQLNPHASSGISHNASSNPPYFNEIKNEMSSLDDVWNSIDLDNYLDMGNNDYMIPKTYMLSSVEDVSGMHQSN 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1323 249 Gene3D NAC domain 49 90 IPR036093 GO:0003677|GO:0006355
Lele19g1323 249 Gene3D NAC domain 91 136 IPR036093 GO:0003677|GO:0006355
Lele19g1323 249 MobiDBLite consensus disorder prediction 1 17 - -
Lele19g1323 249 Pfam No apical meristem (NAM) protein 41 89 IPR003441 GO:0003677|GO:0006355
Lele19g1323 249 SUPERFAMILY NAC domain 35 130 IPR036093 GO:0003677|GO:0006355
Lele19g1323 249 MobiDBLite consensus disorder prediction 1 27 - -
Lele19g1323 249 PANTHER NAC TRANSCRIPTION FACTOR 56 40 86 - -
Lele19g1323 249 ProSiteProfiles NAC domain profile. 40 204 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1323 Lele-ChrLele19 9638825 9641090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1323 27 131 NAC Transcription Factor Family AT1G61110 27.273 7.62e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele19g1323 NAM 3.3e-08 No_clan