Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1317 ATGAGTTTGCATCGTTTTGAAGCACTGCATTATCTCAAATTGAATCCTGCATTTTCGTGTTCTCCGATTAATTTTTCCAGATCCTTTCTATGTCTTTTCTCTACTGTTGTTTCTTCCCCAACTCAACCCTCACCTGAACGCGTTCCCATCATTGATTATCTAAGCATCAACTTCAAATTATCCAAATCTCAATCCGTCGGTATCTCAAAACGACTCTCTAAGTCTAGGTGCCCTCAGCATCCATGGACCGTGCTTAATTACTTTAAACAGATTGGGCTTTCTGAATCGCAGATTCAATCTATGATTACTCGTAAACCCCAAATGTTGTTCTCACATGTGGATAAAACCCTAAAGCCCAAAATTGAGTACTTTGAGCTTCTAGGGTTTCAGGGTTCTAAGTTGGGCGAGTTTCTCTCAAAGAATGCATATCTTTTGATGTGTAATTTGAATAAAACGGTGGTGCCCTCTGTGGAGCTTATTAGGAAACTTGTTAATAATGAGGAAGATTTCATTAAGGTGCTTCAACGATATGGGAGTTACATAATCCCAAACCAACAAAAGGTTTTGCGCAGTGCTGCTTTCTTCGAGAGTTGTGGGATCGTTGGGTCTCAGCTTTCATTTTTACTGACACACGATGCTCGTCTTTTTTTAACTCGAGAGTCCATGCTTCGAGACTATGTTTCACGAGCTGTAAACATGGGTTTCTCCATGAACTCGGGAATGTTTGTATATGTACTCAGGACAATTAGTGGTTTGAGCACTGTTAAGTTCAACAGGAAGTTAGAGTTAATTCAGAGCTGTGGGTTTTCAAAACATGAGACCATGGAAATGTTTAGAAGAGCTCCGGGGTTGCTTAGCAAATCTGAGAAGCGTTTAGAACTTGGAATTCAAGTGTGCTTGGATACAATCATGCTGCCTAAGTCACTACTGGTTAATAACCCTGTGATTTTGATGATGAGCATGGAGAAGAGGGTGATTCCTCGATGGAGGGTTCTGCAACTGATAATCTCAAAAAAATTACTCATGAAAAATCCAAGTTTTCTTCTGGTTCTTCGATTGCAGGAGCAGAAATTCTTGGAGAAGTATATTTCCAAGTTTAGAGATAATGAAGAGGCTTTACTAGAGGCTTACAAGGGCCACTATCTGGAAGATGCTTCTGCATAA 1164 0.4012 MSLHRFEALHYLKLNPAFSCSPINFSRSFLCLFSTVVSSPTQPSPERVPIIDYLSINFKLSKSQSVGISKRLSKSRCPQHPWTVLNYFKQIGLSESQIQSMITRKPQMLFSHVDKTLKPKIEYFELLGFQGSKLGEFLSKNAYLLMCNLNKTVVPSVELIRKLVNNEEDFIKVLQRYGSYIIPNQQKVLRSAAFFESCGIVGSQLSFLLTHDARLFLTRESMLRDYVSRAVNMGFSMNSGMFVYVLRTISGLSTVKFNRKLELIQSCGFSKHETMEMFRRAPGLLSKSEKRLELGIQVCLDTIMLPKSLLVNNPVILMMSMEKRVIPRWRVLQLIISKKLLMKNPSFLLVLRLQEQKFLEKYISKFRDNEEALLEAYKGHYLEDASA 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1317 387 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Lele19g1317 387 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Lele19g1317 387 SMART mt_12 171 201 IPR003690 GO:0003690|GO:0006355
Lele19g1317 387 SMART mt_12 240 270 IPR003690 GO:0003690|GO:0006355
Lele19g1317 387 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Lele19g1317 387 SMART mt_12 206 236 IPR003690 GO:0003690|GO:0006355
Lele19g1317 387 SMART mt_12 307 339 IPR003690 GO:0003690|GO:0006355
Lele19g1317 387 Pfam mTERF 252 359 IPR003690 GO:0003690|GO:0006355
Lele19g1317 387 Pfam mTERF 85 216 IPR003690 GO:0003690|GO:0006355
Lele19g1317 387 Gene3D Transcription termination factor 3, mitochondrial 166 368 IPR038538 -
Lele19g1317 387 FunFam Mitochondrial transcription termination factor-like 149 369 - -
Lele19g1317 387 PANTHER CGI-12 PROTEIN-RELATED 50 366 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1317 Lele-ChrLele19 9589822 9590985 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele19g1317 mTERF 3e-16 No_clan