Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1314 ATGCTGACCGGCAGAGAAAGCTTGATTCGATTGGTCGGCAAACGCAGGCGTTTTCTTCCCAATCGTCAGTCTCTCTTCTCCAATCCAGAAAAGATCTCTTTGAATCTGTGCAATGACAATGATGGAAAAATTTGCTTGGGAAAGTCTGCCGAACAACCTCAGGAAGTTAATTTGAACCAATTTAAATCTGTTGGGGATAAGATTGAGAATAATACCTCTCATGGTGAGATAGCTTGCCCAGTTTGTGGCTGTGAGATTCATGGGGATAACTACGAAGTCAATTCTCATCTTGATGTATGTCTCTCTCGAAGAACCAAGCGAAAACTCACTCAACGCACCCTCCTTCAGTTGAACTTCAGCCCAACATTAAAAGTGCAAAATATTCCTGGTGACTCATTGAAGTCAGAAAATGCTGTGGTCCTGAGAAATTGTAATAACCATGTTCCACAGAATCCAAGTAATGGTTTACCTACTCTTGCGGCCAGGGAAGAAAGTGACAAAAAGTCTAAACTTACTCAAAATCTGGACCATAATCACAATAGTTGTAGCAAAATTGGAAGCTCATCCTTGTCATCTAAGGATGAGCTGCCAAAATCAGAGCTGACTAATTGTAGGTCCACCATATCTGGGGTGACACTTGAAACTTTTTTAGTTGGTCGTAGATATACTGGTCATGAGGAGATACATCCTGGTGATACCTTCTCTCTTTTGAGGGACCCTCACAATGTTAATGATTTCAATGCCATTAAGGTTGTTTCTGCTGATTCTGAAAGTTTTAAATTATTTGGTTTCCTCTCTCGTGAGCTGGCACAATATCTATCACCTCTAATTGACAATTATGGCCTTATATTTGAGGGACTTATCACTTCTGTTCCAGAACATTCTCTTGATGCTGTTCCAATTCAAATTGTATGCCGAGGGGACTTTGAAAGTAGGCTAGACGATGAAACTTTCAAATGTTTATGGGAAAATGCTCAGCATGTGGTTGAGATCAGAAGGAACAATCCACCTTCTGTGAAGTATCAGCTCAATTTTTGTCTTATATTGCAGGAGGTGTTGAGAAGTAATTTTCACCTTTTAACTGATGATGAAAAAGAGTATCTAGAGTTATTCACTATGCTCCCCAATGATAGTCAGAGACTTTTTATCAGGCTATACACTAGAAAAGGACCTTGGTTTCGCATGTCTTGTATATCCTATACTGAAATAATAGATGTTGAAAGAGCAGTGAAGGGACTTGCTGACAAAAGATATGTATGTTATGTTGAAGATGGAGATGACATATGTGAAAGTGAGATGAAAGATATTTTGAATACGCTTACAGTCTCCGAGCTACGTGAAATTTGGTGTATTCTTAAAAGGAATTGCAATCGTGGGTTGAGAAAGCAAGATCTTGTCGCATCTCTTCTTTCTACATACGCAGATGGACTATGGCCATGCCTATCAACAAAGGTTTTGGATAGAACTGGCACCTGTATCAAAATATCTTCAAAAGCTGAAACTCTCATATGGCGTGCTGAGAGGCTTTTCTTCTTAAATGGAGAGCAGGATCTCTCAACGTTTCTACTTGTTGACATGGGAAAAGTCAAGTATCCAACTTACAATTGCATAATATCAGAACCGATTTTCTCTAATCGCAGTGACCTGCTTTTGTACGAGGAGGCCATTGAAGTGGCTCAGATAATGGATGAAGCTCTTGATGCACCCAACAATGAATTGATATTCAAATGCATAAAGATTGCTGAATCCCATGTATCTACCGTTTTGCCGATCCAGCACTCAACTTCTGAATCAGTAGCTGCATCTCGTCATTTATATACTGCATCATGGGTACATTCCAAAGTTGTCACATTGGGGATTTCATTTCTTGAGCAAGAGCGCAGGTACATTGATGCAATTGACTTACTGAAGCAGTTACTGAGTTTTTTCATGCATGACGTAAGACGAGGATATTGGACACTGAGGTTATCTGTTGACTTGGAGCACCTAGGCTATACTGAAGAGAGCCTTCAGGTAGCTGAAAATGGGTTGCTTGATCCATGGATACGTGCTGGCTCAAGAGTGGCACTTCAAAGACGGATTCTTCGCTTAGGAAGACCACCAAGGAGATGGAAAGTTCCTAGCTTTTCAAAGTCCATAAAGAGGGGGATCACTGAGGTTTTTGTTCAAGGGAGACCTTTGAATTCTGAATTGGGTGCAAAGAACAGGTTCTATAATGAAGAGGGGGAGCAGTGTGGAGTGGAACAGCTTGCTTTGCATTATTACGCTGGGATGGGAGGCGGATGGCAGGGTGTTCATACAGAAAGTGGGATATGGTTGACCATCTTTGGCCTTCTTATGTGGCATATCATATTTGCAGATGTACCAAATGTCTTCTACAATAGATTTCAGGTTGCACCCTTGGATCTCGGCACTGATGGATTTTATACAGTGAGAAAGGGTATCATAGAATCTCATCTTCAAACAATTCATGATGGCATGGCTCAGGAATTACTCATAAAATCATGGGAAACACATTATGGTACAAGGTGCAGAGGAGTCAATTGGGATCGCCATTCTTTAGATGAGCTTCGTGCTGCTGTTGCGTGTGTCGGAGGCCCCTGTTTGGCCTCTCTTTGCAGACTATTTGCTCAAGACTATCAGAGCTGGTCCAGTGGAATGCCAGATTTACTGCTATGGCGTTTCCATGGGGAATACAGCGGTGAAGCCAAGCTTGTTGAAGTTAAAGGTCCCAAAGATCGCCTCTCCGAACAGCAACGAGCATGGCTGCTTCAGCTTATGGATTGTGGATTCAAGGTAGAGGTTTGTAAGGTGAAGCCATGA 2823 0.4166 MLTGRESLIRLVGKRRRFLPNRQSLFSNPEKISLNLCNDNDGKICLGKSAEQPQEVNLNQFKSVGDKIENNTSHGEIACPVCGCEIHGDNYEVNSHLDVCLSRRTKRKLTQRTLLQLNFSPTLKVQNIPGDSLKSENAVVLRNCNNHVPQNPSNGLPTLAAREESDKKSKLTQNLDHNHNSCSKIGSSSLSSKDELPKSELTNCRSTISGVTLETFLVGRRYTGHEEIHPGDTFSLLRDPHNVNDFNAIKVVSADSESFKLFGFLSRELAQYLSPLIDNYGLIFEGLITSVPEHSLDAVPIQIVCRGDFESRLDDETFKCLWENAQHVVEIRRNNPPSVKYQLNFCLILQEVLRSNFHLLTDDEKEYLELFTMLPNDSQRLFIRLYTRKGPWFRMSCISYTEIIDVERAVKGLADKRYVCYVEDGDDICESEMKDILNTLTVSELREIWCILKRNCNRGLRKQDLVASLLSTYADGLWPCLSTKVLDRTGTCIKISSKAETLIWRAERLFFLNGEQDLSTFLLVDMGKVKYPTYNCIISEPIFSNRSDLLLYEEAIEVAQIMDEALDAPNNELIFKCIKIAESHVSTVLPIQHSTSESVAASRHLYTASWVHSKVVTLGISFLEQERRYIDAIDLLKQLLSFFMHDVRRGYWTLRLSVDLEHLGYTEESLQVAENGLLDPWIRAGSRVALQRRILRLGRPPRRWKVPSFSKSIKRGITEVFVQGRPLNSELGAKNRFYNEEGEQCGVEQLALHYYAGMGGGWQGVHTESGIWLTIFGLLMWHIIFADVPNVFYNRFQVAPLDLGTDGFYTVRKGIIESHLQTIHDGMAQELLIKSWETHYGTRCRGVNWDRHSLDELRAAVACVGGPCLASLCRLFAQDYQSWSSGMPDLLLWRFHGEYSGEAKLVEVKGPKDRLSEQQRAWLLQLMDCGFKVEVCKVKP 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1314 940 PANTHER FANCONI-ASSOCIATED NUCLEASE 1 4 940 IPR033315 GO:0004518|GO:0036297
Lele19g1314 940 MobiDBLite consensus disorder prediction 146 195 - -
Lele19g1314 940 SMART VRR_NUC_a_2 823 940 IPR014883 GO:0016788
Lele19g1314 940 Gene3D - 868 939 IPR011856 GO:0003676
Lele19g1314 940 SMART HIRAN_2 210 307 IPR014905 GO:0003676|GO:0008270|GO:0016818
Lele19g1314 940 Gene3D - 203 319 - -
Lele19g1314 940 Pfam VRR-NUC domain 826 939 IPR014883 GO:0016788
Lele19g1314 940 MobiDBLite consensus disorder prediction 175 195 - -
Lele19g1314 940 Pfam HIRAN domain 212 294 IPR014905 GO:0003676|GO:0008270|GO:0016818
Lele19g1314 940 SMART c2hc_5 76 101 IPR006642 GO:0003677|GO:0006281
Lele19g1314 940 Gene3D Classic Zinc Finger 76 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1314 Lele-ChrLele19 9549237 9562578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1314 184 295 RAD5 or RAD16-like Gene Family AT5G05130 27.273 2.04e-06 50.1