Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1307 ATGAGAATGCGCGTTATATGGAACCAGGAGAAGATTACAGAACTGAAGAAAAAAGTTTATCTTTTGAAGAAAAAGCCTGCAGCTTTTGACCCGAGTTCGATATCTTGTTGGGACAAGGGTAAACCTGTGCCCTTTCTGTTTCTCGGTTTGGCATTTGATATGATTGTGAAAGAAAGAGGACGGGTTGTGATTACAGATATAATGTACAATATGCTGAGGACTGTCATGAACACTACACCCGAGGATCTCTTGGCTGCTACAAAGATTGTTGAACAAGTGTATTCTGTTCTTCCTGACTATGACAAAATAATTCCTACATTGCTTAGTGGTGGTGTATGGAAACTTCCAGACACGTGTAACTTTACTCTTGATGTTCCAGTTGGACCTATGCTGTCTAAAACAACTAAGGGTGTGTCTGAAGTTCTAAATAAATTCCAGGATATAGAGTTTACTTGTGAATACAAATATGATGGAGAGCTTGCCCAGATACATTACATGGATGATGGATCGGTTCAGATTTACAGTAGAAATGCTGAAAAGAACACTACAAAGTTTCCTGATGTTGTTGCTGCGATTTCAAGGTAA 585 0.3897 MRMRVIWNQEKITELKKKVYLLKKKPAAFDPSSISCWDKGKPVPFLFLGLAFDMIVKERGRVVITDIMYNMLRTVMNTTPEDLLAATKIVEQVYSVLPDYDKIIPTLLSGGVWKLPDTCNFTLDVPVGPMLSKTTKGVSEVLNKFQDIEFTCEYKYDGELAQIHYMDDGSVQIYSRNAEKNTTKFPDVVAAISR 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1307 194 Gene3D DNA ligase/mRNA capping enzyme 129 194 - -
Lele19g1307 194 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 27 88 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Lele19g1307 194 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 19 87 - -
Lele19g1307 194 Gene3D - 88 128 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Lele19g1307 194 Gene3D - 21 87 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Lele19g1307 194 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 88 192 - -
Lele19g1307 194 Pfam ATP dependent DNA ligase domain 129 193 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1307 Lele-ChrLele19 9494163 9496643 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1307 11 85 Core DNA Replication Machinery Family AT1G08130 65.333 8.13e-28 107