Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1306 ATGGAGGAGGAGAAGAAAGAGGAGATGCAGAGGAATAAAGAAGTGCGGTACCGCGGAGTCCGGCGAAGGCCGTGGGGGAAGTTTGCGGCGGAGATAAGGGACCCGACAAAGCAAGGGGCAAGGCTGTGGCTGGGGACATTTGATACAGCTGAAGAAGCAGCAAGAGCTTATGACCAAGCAGCTTACAACTTTAGAGGACAGCTTGCAGTTCTTAATTTCCCCGAACACTTCAATCTTCCTCCGCCGCCGCCATATCAACCGTTCTCTTCTTCTTCTTCTTCGCCGTCTTCTTCTTATGGAGCTGGCGACATTACTGCAAGTTCCTCAACAAGTACTGCTGAAGGACAGCACTTGCAAAGGGAAGTTATTGAGTTTGAGTGTTTGGATGATAAGATATTGGAAGATCTTCTTGAATCTCAAGAGAAGAACAATAAAAAACAAGATTGA 447 0.4743 MEEEKKEEMQRNKEVRYRGVRRRPWGKFAAEIRDPTKQGARLWLGTFDTAEEAARAYDQAAYNFRGQLAVLNFPEHFNLPPPPPYQPFSSSSSSPSSSYGAGDITASSSTSTAEGQHLQREVIEFECLDDKILEDLLESQEKNNKKQD 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1306 148 Pfam AP2 domain 16 66 IPR001471 GO:0003700|GO:0006355
Lele19g1306 148 MobiDBLite consensus disorder prediction 90 117 - -
Lele19g1306 148 PANTHER DNA-BINDING DOMAIN 6 143 IPR044808 GO:0003700|GO:0009873
Lele19g1306 148 CDD AP2 16 76 IPR001471 GO:0003700|GO:0006355
Lele19g1306 148 MobiDBLite consensus disorder prediction 75 117 - -
Lele19g1306 148 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Lele19g1306 148 Gene3D AP2/ERF domain 15 76 IPR036955 GO:0003700|GO:0006355
Lele19g1306 148 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Lele19g1306 148 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Lele19g1306 148 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Lele19g1306 148 FunFam Ethylene-responsive transcription factor 2 15 75 - -
Lele19g1306 148 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1306 Lele-ChrLele19 9482940 9483386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1306 12 142 AP2-EREBP Transcription Factor Family AT3G23230 54.962 3.92e-44 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele19g1306 AP2 5.4e-16 CL0081