Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1286 ATGTCAGACGACGGCCAGAGATGGAGTAGCAAAAGGAGATGGACTCCGGCACAGAAACAACTTGAGATTCTTGAGAGTATATTCGAGGGAAGCGGCGGAGTTCATCCAAACAAGAAGAAGATCCAAGACATTACGGCAGTATTGAGCCGCCATGGCCAGATTTCTGAGGCCAATGTGTACAACTGGTTCCAGAATCGACGTGCACGATTGAAGAGGAAATTGCAGATAGAAGAACATGATAATCATAATAATCAACCACAAGTGAAGATGAAGATGATTCCAGTTGATCAATTAGTGTTGCCTAGTACAAGTTATAACAATAATGATGATCATGCCACTCAAGTTGAGTCCATGTGTAGGGTTAATGATTATGTGAGATTTAGAGAGAGTGAGTGA 396 0.4217 MSDDGQRWSSKRRWTPAQKQLEILESIFEGSGGVHPNKKKIQDITAVLSRHGQISEANVYNWFQNRRARLKRKLQIEEHDNHNNQPQVKMKMIPVDQLVLPSTSYNNNDDHATQVESMCRVNDYVRFRESE 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1286 131 CDD homeodomain 11 73 IPR001356 GO:0003677
Lele19g1286 131 PANTHER WUSCHEL-RELATED HOMEOBOX 13 4 89 IPR044559 GO:0003700
Lele19g1286 131 SMART HOX_1 9 77 IPR001356 GO:0003677
Lele19g1286 131 Pfam Homeodomain 11 72 IPR001356 GO:0003677
Lele19g1286 131 ProSiteProfiles 'Homeobox' domain profile. 7 73 IPR001356 GO:0003677
Lele19g1286 131 Gene3D - 11 77 - -
Lele19g1286 131 SUPERFAMILY Homeodomain-like 5 76 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1286 Lele-ChrLele19 9227035 9227430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1286 1 73 Wox Gene Family AT4G35550 60.274 4.60e-24 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele19g1286 Homeodomain 7.8e-16 CL0123