Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1270 ATGGTGAACAAAGTCATCTTAATCTCTCTTCTTCAACTAGCAATTCTGGCTAATCCTTGGTGGACCGGTCATCATGTGGGGTTGCCGGGAGTTGACCCGGCGACCAATTCACCGGCGGTGAACAAACGGCACAGCACCGACCTCTCTATCAACGAAACCAGCGGGAAGAACAACAGTGGCGGCGATAACAGAGACGAAGACGATTATAGAGATGAACCCAAAGAAGGTGCAGTTGAAGTCGGAAATCGCAGACCTCGAGGCCGCCCACCTGGCTCAAAGAACAAGCCGAAACCTCCCATCTTCGTGACGCGAGACAGCCCCAATGCCCTCCGAAGCCACGTCATGGAGGTCGCCGGCGGAGCCGATGTAGCCGAGAGCGTAGCTCAGTTCGCTCGACGCCGTCAACGTGGGGTTTGTGTTCTTAGTGGAAGTGGCTCCGTCACCAACGTCACTCTTCGCCAACCTGCAGCTCCGGGAGCTCTTGTAGCACTCCATGGAAGGTTTGAGATTCTATCATTAGCCGGAGCCTTCTTGCCGGGTCCCGCGCCACCCGGATCTACGGGACTCACGGTGTACCTCGCCGGAGGGCAAGGCCAAGTCGTCGGGGGAAGCGTGGTGGGGTCACTAGTAGCGGCAGGACCAGTGATGGTAATTGCTGCAACTTTTGCTAATGCAACTTATGAGAGACTACCTCTTGATGATGACGATGAAGGAGGCAACACGGCGGGGCAAGGAGGCGGTGGCAGCGGTGGAGGGTCTTCGCCGCCACCGCCACAACCGAGGATCGGAAGCAGTGGGGGCCACTTGCAGGTTGGTGGGATTCCAGATCCTTCATCACTTCCTTTGTATGATCTGCCACCAAATCTGCTTCCAAATGGTGGGGGTGGACAGGTAGGTCATCATGAAGCTTTTGCTTGGGCATCTCATGGAAGACAACCTTACTAG 945 0.5608 MVNKVILISLLQLAILANPWWTGHHVGLPGVDPATNSPAVNKRHSTDLSINETSGKNNSGGDNRDEDDYRDEPKEGAVEVGNRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVTNVTLRQPAAPGALVALHGRFEILSLAGAFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDDDDEGGNTAGQGGGGSGGGSSPPPPQPRIGSSGGHLQVGGIPDPSSLPLYDLPPNLLPNGGGGQVGHHEAFAWASHGRQPY 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1270 314 MobiDBLite consensus disorder prediction 38 58 - -
Lele19g1270 314 SUPERFAMILY AF0104/ALDC/Ptd012-like 107 234 - -
Lele19g1270 314 MobiDBLite consensus disorder prediction 59 82 - -
Lele19g1270 314 ProSiteProfiles PPC domain profile profile. 107 245 IPR005175 -
Lele19g1270 314 MobiDBLite consensus disorder prediction 230 300 - -
Lele19g1270 314 FunFam AT-hook motif nuclear-localized protein 110 237 - -
Lele19g1270 314 MobiDBLite consensus disorder prediction 37 107 - -
Lele19g1270 314 CDD DUF296 111 194 IPR005175 -
Lele19g1270 314 Gene3D - 110 239 - -
Lele19g1270 314 PIRSF ESCAROLA 30 314 IPR014476 GO:0003680
Lele19g1270 314 Pfam Plants and Prokaryotes Conserved (PCC) domain 111 223 IPR005175 -
Lele19g1270 314 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 53 307 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1270 Lele-ChrLele19 9080460 9082774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1270 16 314 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 60.066 8.85e-96 283