Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1269 ATGAAGAAAGTGGTGCAGGACGATATGGGGTTACACTGGTGGAGTGTTGATTGCAATTTAGGTTTTGCTTCATACTGTGGCACTTTTTCTGCAGAAAATTTTTGTGATTTTCTTTTGGCTTTTGAGAACGTTATTGTTCAACGGGTCGTGAGCTACTATGTTGTTATTTTTGGATGGATTAAAGAGAACAACCATATTGGATCAATGTTTAAAGCAGTAGCATCTGGACTTTCAATTTTGCTCCTCGTGAAATGTGTATCTGCAACAGATAATGAATTTCCCAGATGTAACTGTGATGATGAGGCCAGCTTGTGGACTATTGAGAGTATTCTGGAGTGCCAAAGAGTCAGTGATTTGTTGATTGCTGTGGCCTACTTCTCCATACCCATTGAGCTGCTTTGTTTTATCAGTTGTGCGAATGTCCCATTCAAATGGGTTCTTGTTCAGTTCATTGCCTTCATTGTACTATGTGGATTGACACATTTGCTGAATGCATGGACTTATGGTCCTCACTCTTTCCAACTGATGGTGGCACTTACAGTATTCAAAACTCTTACGGCTTTGGTATCGTGTGCCACTGCTATTACTCTCATGACTCTCATTCCTTTACTTCTTAAAGTGAAGGTCAGAGAATTAATGCTGAGGAAAAAGACCTCCGAACTTGGACGAGAGGTTGGTATTATAATGAGGCAAAAGGAAGCTGCAAAACATGTAAGGATGCTCACTCGAGAGATTCGCAAGTCGCTTGATAGGCATAATATTTTGTACACCACCTTGGTGGAGCTGTCTGAAACACTTGGTTTGCAAAATTGTGCTGTCTGGATGCCTAATTTTGATAAAACAGAGATGAACCTTACTCATGAATTGAATAGGAGGAATCTTAATTCTTCTATACCCATCACGGATCCAGATGTTGTGAGAATTAAGGTAACTGATGGAGTAAATATTCTTAGCCCTGTCTCAGCACTTGCTGCTGCTAGTAGTGGAAGTTCTTCTGAGGCAGGACCAGTGGCTGCAATTCGGATGCCGATGCTTCGTATTTGCAATTTCAAAGGCGGGACCCCTGAAGTAAGGCAGGCATGTTATGCGATATTGGTTCTGATTCTTCCTGGTGGAGAGCCAAGATCTTGGAGCAATCAGGAGCTGGAAATAGTTAAAACGGTTGCTGATCAGGTTGCTGTAGCTCTCTCTCATGCTGCAATTCTTGAGGAATCCCAACTCATGAGAGAGAAGTTGGAGGAGCAAAATCGAATTCTACAACAGGCACAAAGGAATGCTTTGATGGCGAGTCAGGCAAGAAACTTATCTCAGAAGGTCATGAGTGATGGAATGAGAAGACCAATGCACTCAATTTTGGGTTTGCTTTCAATTATACAAGATGAGAACTTGAAAAGCGAACAGAAACTCATTGTGGATTCGATGCTGAGAACCAGTAATGTCCTATCAAACTGGATAAATGATGCCATGAATATTTCAGCCAAGGATGACGGGGGATTTCAATTGGAGATGAGATCTTTTGGGTTTCATGCCATGATAAAAGAAGCAGCATGCCTTGCCAAGTGTCTTTGCGTTTATAGGGGCTTTGGTTTTAAAATCGAGTGTGAGAAGTCTTTGCCCGACAACGTTATGGGTGATGAGAGGAGGGTTTTTCAGGTGATTCTACATATGGTTGGGAACTTATTGGATGGTAATCACAGGGGAGGGATTCTTGTACTTCGTGTTCTTGCGGAAAGAGGAAGTCAGGAAAGAAATGACCATGGGTGGACAGCCTGGAGACCAAGCTCAACTAGTAGGAACGTAGATATTAGATTTGAGATAGGGATCAGTAGAGGCAATTATGACTTGGATAGTTCACTTTCTTTAGCAGTTGGCGGTAGGAAATATTCTAGTTGTAGAGATGAAGTCAGATTGAGCTTCAGCATATGCAAGAGGATAGTTCAGTTGATGCAAGGGAACATATGGTTTGTACCAAATACCTTAGGTTATCCTCAAACCATGGCCCTTGTTCTTCGGTTTCATTTACGACAGTCTATTTCTATTTTCATCTCTGAGCCTGGTGAATCCTCTGAGCGCACAGATTCTAATTCTCTGCTCAGAGGTCTGCAAGTCTTGTTGGCTGACAATGACGATGTAAATAGAGCTGTGACACAAAAGTTGCTTCAGAAGCTTGGTTGTGTCGTAACTTCTGTTTCTTCAGGATTTGAATGCCTTGCTGTCATTGCACCTGCTGGATCTTCTATTGAAGTCATTCTCCTGGATCTTCATATGCCTGAGTTAGATGGCTTTGAAGTTGCCACAAGGATTCGGAAATTTAGAAGCCGAAATTGGCCAATGATTGTTGCCTTGACTGCAAGTGCCGATGAAGATTTGCGTGAAAGATGTATGCAAATTGGTGTCAATGGAATTATAAGAAAACCTGTTATGTTGCAGGAAATTGCCAGTGAATTTCGGAGGATCCTGATGCATGCACGGAAATGA 2478 0.4197 MKKVVQDDMGLHWWSVDCNLGFASYCGTFSAENFCDFLLAFENVIVQRVVSYYVVIFGWIKENNHIGSMFKAVASGLSILLLVKCVSATDNEFPRCNCDDEASLWTIESILECQRVSDLLIAVAYFSIPIELLCFISCANVPFKWVLVQFIAFIVLCGLTHLLNAWTYGPHSFQLMVALTVFKTLTALVSCATAITLMTLIPLLLKVKVRELMLRKKTSELGREVGIIMRQKEAAKHVRMLTREIRKSLDRHNILYTTLVELSETLGLQNCAVWMPNFDKTEMNLTHELNRRNLNSSIPITDPDVVRIKVTDGVNILSPVSALAAASSGSSSEAGPVAAIRMPMLRICNFKGGTPEVRQACYAILVLILPGGEPRSWSNQELEIVKTVADQVAVALSHAAILEESQLMREKLEEQNRILQQAQRNALMASQARNLSQKVMSDGMRRPMHSILGLLSIIQDENLKSEQKLIVDSMLRTSNVLSNWINDAMNISAKDDGGFQLEMRSFGFHAMIKEAACLAKCLCVYRGFGFKIECEKSLPDNVMGDERRVFQVILHMVGNLLDGNHRGGILVLRVLAERGSQERNDHGWTAWRPSSTSRNVDIRFEIGISRGNYDLDSSLSLAVGGRKYSSCRDEVRLSFSICKRIVQLMQGNIWFVPNTLGYPQTMALVLRFHLRQSISIFISEPGESSERTDSNSLLRGLQVLLADNDDVNRAVTQKLLQKLGCVVTSVSSGFECLAVIAPAGSSIEVILLDLHMPELDGFEVATRIRKFRSRNWPMIVALTASADEDLRERCMQIGVNGIIRKPVMLQEIASEFRRILMHARK 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1269 825 CDD HATPase_ETR2_ERS2-EIN4-like 538 670 - -
Lele19g1269 825 CDD HisKA 430 492 IPR003661 GO:0000155|GO:0007165
Lele19g1269 825 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 92 823 - -
Lele19g1269 825 PIRSF Ethylen_sen_hybr_HK 69 825 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Lele19g1269 825 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 486 658 IPR036890 -
Lele19g1269 825 Pfam Response regulator receiver domain 703 814 IPR001789 GO:0000160
Lele19g1269 825 SMART REC_2 701 816 IPR001789 GO:0000160
Lele19g1269 825 FunFam Ethylene receptor 699 823 - -
Lele19g1269 825 Pfam GAF domain 250 396 IPR003018 GO:0005515
Lele19g1269 825 SUPERFAMILY GAF domain-like 254 399 - -
Lele19g1269 825 SUPERFAMILY CheY-like 699 820 IPR011006 -
Lele19g1269 825 ProSiteProfiles Response regulatory domain profile. 702 820 IPR001789 GO:0000160
Lele19g1269 825 Gene3D - 496 676 IPR036890 -
Lele19g1269 825 Gene3D - 683 821 - -
Lele19g1269 825 Coils Coil 402 432 - -
Lele19g1269 825 CDD REC_ETR-like 701 815 - -
Lele19g1269 825 FunFam Ethylene receptor 4 399 493 - -
Lele19g1269 825 SMART HisKA_10 432 497 IPR003661 GO:0000155|GO:0007165
Lele19g1269 825 Gene3D - 398 495 - -
Lele19g1269 825 Gene3D - 228 397 IPR029016 -
Lele19g1269 825 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 418 497 IPR036097 GO:0000155|GO:0007165
Lele19g1269 825 SMART gaf_1 250 406 IPR003018 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1269 Lele-ChrLele19 9052971 9056856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1269 90 823 Miscellaneous Gene Families AT3G04580 57.564 0.0 817
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele19g1269 GAF 1.1e-11 CL0161