Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1229 ATGGAACCAGGCGTCCCTCAGCCGCCGCCTACACTCCCGGCACCTCCGGCCTCACCCTCTCCCTCCTCCTCCGCCGTCACCATCCTCGGAAAGTACCAGTTGATCCGTCTTCTAGGTCGTGGCAGCTTCGCCAAGGTTTACCAGGCTCGATCCTTAAGTGATGGCTCCATCGTCGCCGTCAAGATCATCGACAAGTCGAAAACCGATGCCGCCATGGAGCCTCGGATTGTTCGTGAGGTTGATGCAATGCGACGGCTTCACGACCATGCGCATGTTCTTAAAATCCATGAGGTTTTGGCTACGAAGACGAAGATCTACCTGATTGTGGAGTTCGCTGCCGGCGGGGAGTTATTCTCGAAGATCTCGCGTAAAGGCCGGTTGACGGAACCGGTGGCGCGGCGGTACTTCCAGCAATTAGTTTCCGCCCTCTGTTTCTGCCACAAAAACGGTGTCGCACACCGTGATGTGAAGCCTCAGAATCTTCTTTTGGACCAGGAAGGTAATCTGAAGGTCTCCGATTTCGGACTCTCCGCCTTACCGGAACAGCTTAAAAACGGTTTGCTCCACACGGCTTGTGGCACGCCGGCTTATACCGCGCCGGAGATCCTCTTCCGGCGCGGATACGACGGCTCGAAAGCCGACGCGTGGTCTTGTGGGCTTATACTCTACGTACTGCTCGCCGGCTACCTCCCGTTCTCCGACGCCAACATCCCTGAGATGTGCAAGAAGATCAGCCGGCGCGATTACCAGTTCCCGGAGTGGATATCCAAACCGGCCCGGTTCGTGATTAACCGACTACTCGAACCGAACCCCAAGAATCGGATGAGTCTAGAATCTCTCTACCAAAACTCGTGGTTCAAGAAATCGCTAAAGCCCCAACCCGACGAGAGCTTATTCGAGTCGGGTCCCACCGCGAAATCGTATCAAAAGCTGGAAAGAACAGGTTCGGGCGTGAACGCATTCGACATAATCTCCATGTCTTCAGGTTTGGACCTGACGGGGTTGTTTGAAACGACGTCGGATAATAGGAGAGAAAAGAGATTCACAACGAATGCTTCCCTGAAAGTAGTGGAAGAGAAAGTGAAGGAAGTAGGAGGAATTTTAGGATTCAAAGTTGAGATAGGTAAGAACGGAGCTATTGGATTCGGGAAAGGAAAAGTGGTTCTTGTGGTGGAGGTGTTTGAGGTAGTTCCTGAGTTGTTAATGGTGACAGTGAAAGTGATAAATGGTGGGTTTGAATTTGACGAACTTCACTGGGGACACTGGAAATCTGGGCTTCAAGATGTTGTTCTTTCATGGCACAATGAATCCCTGTGA 1317 0.5232 MEPGVPQPPPTLPAPPASPSPSSSAVTILGKYQLIRLLGRGSFAKVYQARSLSDGSIVAVKIIDKSKTDAAMEPRIVREVDAMRRLHDHAHVLKIHEVLATKTKIYLIVEFAAGGELFSKISRKGRLTEPVARRYFQQLVSALCFCHKNGVAHRDVKPQNLLLDQEGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTAPEILFRRGYDGSKADAWSCGLILYVLLAGYLPFSDANIPEMCKKISRRDYQFPEWISKPARFVINRLLEPNPKNRMSLESLYQNSWFKKSLKPQPDESLFESGPTAKSYQKLERTGSGVNAFDIISMSSGLDLTGLFETTSDNRREKRFTTNASLKVVEEKVKEVGGILGFKVEIGKNGAIGFGKGKVVLVVEVFEVVPELLMVTVKVINGGFEFDELHWGHWKSGLQDVVLSWHNESL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1229 438 SUPERFAMILY Protein kinase-like (PK-like) 28 294 IPR011009 -
Lele19g1229 438 MobiDBLite consensus disorder prediction 1 20 - -
Lele19g1229 438 Gene3D Phosphorylase Kinase; domain 1 35 116 - -
Lele19g1229 438 FunFam Non-specific serine/threonine protein kinase 25 116 - -
Lele19g1229 438 Gene3D Transferase(Phosphotransferase) domain 1 117 304 - -
Lele19g1229 438 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 26 406 - -
Lele19g1229 438 FunFam Non-specific serine/threonine protein kinase 22 314 - -
Lele19g1229 438 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1229 438 ProSiteProfiles Protein kinase domain profile. 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1229 438 SMART serkin_6 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1229 438 FunFam Non-specific serine/threonine protein kinase 314 431 - -
Lele19g1229 438 MobiDBLite consensus disorder prediction 1 22 - -
Lele19g1229 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Lele19g1229 438 Pfam NAF domain 318 373 IPR004041 GO:0007165
Lele19g1229 438 Gene3D Kinase associated domain 1, KA1 315 431 - -
Lele19g1229 438 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Lele19g1229 438 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1229 Lele-ChrLele19 8368578 8369894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1229 16 435 CBL-interacting serine-threonine protein kinases AT4G14580 59.016 8.97e-166 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele19g1229 Pkinase 7.1e-69 CL0016