Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1206 ATGCCATTTGTGACCAATTTGGAGACAATACAGAAACTTCTGATTGCTCCGAAGAATCTTAGCAAACCAAACAAAAAATGGCATTCTGCATTTGTTAGTATCTATTGTTACAGAGCTCTCTTGTCTCACTTCAAATCCACTTTGCTTCCCAACACCACCACCATCAACAAGAAGAACTGGTCTAAGTTATCATCTTCTTCCTCCTACACTGTTATCGATTTAAACACAGATCATTCCTTTTCTATTACTCAATCCACCCTCACCAACGTCATCAAGGACAAAAATGTAGAAACCCTGGAAAATCTTGGTGGGGTCCACGGCGTGGTATCTGCTCTCAAAACCGACGTTGAAAATGGAGTCAAAAGCGGTGATGGTGATGGTGATGACGTCATGCGACGCCGCGACGCGTTTGGTTCTAACACTTATCCAAAGCCACCTACGAGAGGTTTCTTCCATTTTGTGATTGAAGGCTTCAAGGACCCCACCATTCTCATTCTCTTGGTTTGTGCCGCTCTCTCTCTTGGCTTCGGCATCAAGGAGAACGGAATCAAAGAAGGCTGGTACGAAGGTGGAAGCATCTTCGTTGCCGTTTTCCTCGTCATTGCTGTCTCTTCCATCAGTAACTTCAGGCAGAGCAGACAGTTCGACAAGCTGTCCCAGGTTAGCAATAACATCCAGGTTGATGTTGTACGAAGTGGTCGCCGGCAACAAGTTTCGATTTACGACATCGTGGTCGGTGATGTTGTTTTGCTTAAGATCGGAGACCAAGTTCCTGCGGATGGCTTGTTCTTGGAAGGCCATTCTCTGCAAGTTGATGAGTCAAGCATGACAGGTGAGAGCGACCACGTAGAGATTAATTTCGACAATAACCCATTTTTGTTTTCTGGGACCAAAGTGGCTGATGGGTTTGCCAAAATGCTGGTTACTTCCGTTGGAACGAACACAACATGGGGTCAAATGATGGGTTCCATAAGCAGAGACAACAATGAAGAAACCCCATTGCAAGAACGCCTCAATAAGCTTACTTCTGCCGTAGGCATGGTTGGTTTGACTGTGGCATTTCTTGTTCTTCTTGTTATGTTAGTTCGCTACTTCACAGGGAACACAACCGATGAGAACGGCAACAAAGAGTTCAACGGAAGAAGAACGAAGTTTGATGACATAATGAATGGAGTTGTGGGAATTGTTGCCGCTGCTGTTACCATTGTTGTGGTTGCAATTCCAGAAGGGCTTCCTCTGGCTGTGACTCTGACACTTGCTTATTCCATGAAGAAGATGATGGCTGACATGGCTATGGTGAGGAAGCTCTCTGCTTGTGAGACTATGGGCTCTGCTACGACCATTTGTACTGATAAGACTGGCACTCTCACGCTTAATCAGATGAAAGTGACTAAGTTCTGGCTTGGACAACAACCCATGGAAGAGAAACCTCATGAATCATCATCATTTCATTCAGATGTTCTTCAACTGATCAAAGAAGGGGTTGCCCTAAACACTACAGGTAGCGTTTACAAGTCTAAATCAAATGATTCTGAATATGAGTTTTCAGGTAGTCCAACGGAAAAGGCCATTCTTTCATGGGCTGTTCTTGATTTGAACATGAACATGGAGGAATTGACGCAGGGTTGTACCATCCTTCATGTGGAAGCCTTCAATTCAAAGAAGAAGAGAAGTGGTGTCTTGATTAGAAGGAAAGCAGACAACAGAATCCATGCACATTGGAAAGGAGCAGCTGAGATGGTACTGAGATTATGTTCAAAGTACTATGATGCTTCTGGCAATATCAAAGATCTTGACGCTGGAAAAAAGTTGGTGTTTGAGCAAATCATTCAAGGAATGGCGGCCAGCAGCCTCAGGTGTATTGCTTTTGCGCATACAGAAGAAGATGAAGAAGGAACCCAAAAGGTAAAAGAAGAAGGCCTCACACTCTTAGGTCTCGTGGGTATTAAGGATCCATGTCGTCCAGGTGTGAAGAAAGCTGTAAACAATTGCCAACAAGCAGGAGTAAATGTCAAGATGATCACAGGAGACAATGTTTTCACGGCAAAAGCCATAGCCACAGAATGCGGAATCCTCCAACCTAATCAAGACACAACAGAAGCAGTCATCGAAGGAGAAGCGTTCCGAAACTTGTCTCCGGAGGAAAGACTAAAGAGAGTGGAGAAAATCTCTGTGATGGCACGATCCTCCCCATTTGACAAGCTCCTCATGGTTCAATGCCTCAAACAGAAAGGCCATGTAGTTGCAGTCACAGGAGATGGCACCAATGATGCACCGGCATTAAAGGAAGCTGACATAGGACTTTCCATGGGGATTCAAGGCACTGAAGTTGCAAAAGAAAGCTCAGATATAGTCATATTGGATGATAATTTCGCCTCGGTCGCCACAGTTCTCAAGTGGGGAAGATGTGTCTATAACAACATCCAAAAGTTCATCCAGTTTCAGCTTACAGTAAATGTTGCAGCTCTTGTAATTAACTTCGTGGCGGCAGTATCAGCAGGAGAAGTGCCGTTAACAGCAGTTCAACTTTTGTGGGTGAACCTGATAATGGACACTTTAGGAGCTTTAGCTCTTGCAACAGAGAAGCCAACAATGGAGTTATTGGACAAACCACCAGTGGGTAGAACTGAAACTCTCATCACCAACATCATGTGGAGAAATCTCTTAGCACAAGCTTTCTACCAGATCGCAATTCTGTTAACGTTGCAGTTCAAGGGTGAAGATATATTTGGGGTGAGTTCAAAGGTAAATGACACTTTGATTTTCAACACATTTGTGCTGTGTCAGGTGTTTAATGAGTTCAATGCGAGGAAGCTGGAGAAGAAGAATGTGTTCCGGGGGATTCATAAGAACAAGCTGTTCATGGGGATAATAGGGATAACCATAGTGCTTCAGGTGTTGATGGTGGAGTTTCTGAAGAAATTTGCAGATACTGAGAGGTTGAATTGGGGGCAGTGGGGTGTTTGCATTTTAATGGCAGCTATTTCTTGGCCTATTGGTTGGGTTGTGAAGTTCATTCCGGTCCCAAGAAAACCATTGCTCAGTTTCTTCAACATGAGGAGGCAATGA 3069 0.4422 MPFVTNLETIQKLLIAPKNLSKPNKKWHSAFVSIYCYRALLSHFKSTLLPNTTTINKKNWSKLSSSSSYTVIDLNTDHSFSITQSTLTNVIKDKNVETLENLGGVHGVVSALKTDVENGVKSGDGDGDDVMRRRDAFGSNTYPKPPTRGFFHFVIEGFKDPTILILLVCAALSLGFGIKENGIKEGWYEGGSIFVAVFLVIAVSSISNFRQSRQFDKLSQVSNNIQVDVVRSGRRQQVSIYDIVVGDVVLLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINFDNNPFLFSGTKVADGFAKMLVTSVGTNTTWGQMMGSISRDNNEETPLQERLNKLTSAVGMVGLTVAFLVLLVMLVRYFTGNTTDENGNKEFNGRRTKFDDIMNGVVGIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGQQPMEEKPHESSSFHSDVLQLIKEGVALNTTGSVYKSKSNDSEYEFSGSPTEKAILSWAVLDLNMNMEELTQGCTILHVEAFNSKKKRSGVLIRRKADNRIHAHWKGAAEMVLRLCSKYYDASGNIKDLDAGKKLVFEQIIQGMAASSLRCIAFAHTEEDEEGTQKVKEEGLTLLGLVGIKDPCRPGVKKAVNNCQQAGVNVKMITGDNVFTAKAIATECGILQPNQDTTEAVIEGEAFRNLSPEERLKRVEKISVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELLDKPPVGRTETLITNIMWRNLLAQAFYQIAILLTLQFKGEDIFGVSSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFRGIHKNKLFMGIIGITIVLQVLMVEFLKKFADTERLNWGQWGVCILMAAISWPIGWVVKFIPVPRKPLLSFFNMRRQ 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1206 1022 PANTHER CATION TRANSPORTING ATPASE 70 1008 - -
Lele19g1206 1022 Pfam Cation transporter/ATPase, N-terminus 102 173 IPR004014 -
Lele19g1206 1022 Gene3D - 156 1006 - -
Lele19g1206 1022 SUPERFAMILY HAD-like 447 856 IPR036412 -
Lele19g1206 1022 Gene3D - 446 796 IPR023214 -
Lele19g1206 1022 Pfam haloacid dehalogenase-like hydrolase 446 765 - -
Lele19g1206 1022 SUPERFAMILY Calcium ATPase, transmembrane domain M 103 1009 IPR023298 -
Lele19g1206 1022 FunFam Calcium-transporting ATPase 768 1010 - -
Lele19g1206 1022 Gene3D - 128 325 - -
Lele19g1206 1022 FunFam Calcium-transporting ATPase 646 796 - -
Lele19g1206 1022 SFLD p-type atpase 431 804 IPR044492 -
Lele19g1206 1022 Pfam E1-E2 ATPase 226 427 - -
Lele19g1206 1022 Gene3D - 459 652 IPR023299 GO:0000166
Lele19g1206 1022 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 722 832 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1206 1022 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 193 366 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1206 1022 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 391 481 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1206 1022 ProSitePatterns E1-E2 ATPases phosphorylation site. 451 457 IPR018303 -
Lele19g1206 1022 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 75 1008 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele19g1206 1022 SUPERFAMILY Calcium ATPase, transduction domain A 224 323 IPR008250 -
Lele19g1206 1022 PRINTS P-type cation-transporting ATPase superfamily signature 751 770 - -
Lele19g1206 1022 PRINTS P-type cation-transporting ATPase superfamily signature 775 787 - -
Lele19g1206 1022 PRINTS P-type cation-transporting ATPase superfamily signature 645 656 - -
Lele19g1206 1022 PRINTS P-type cation-transporting ATPase superfamily signature 272 286 - -
Lele19g1206 1022 PRINTS P-type cation-transporting ATPase superfamily signature 449 463 - -
Lele19g1206 1022 PRINTS P-type cation-transporting ATPase superfamily signature 667 677 - -
Lele19g1206 1022 Pfam Cation transporting ATPase, C-terminus 836 1006 IPR006068 -
Lele19g1206 1022 PRINTS H+-transporting ATPase (proton pump) signature 606 624 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1206 1022 PRINTS H+-transporting ATPase (proton pump) signature 783 808 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1206 1022 PRINTS H+-transporting ATPase (proton pump) signature 751 767 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1206 1022 SFLD Haloacid Dehalogenase 431 804 - -
Lele19g1206 1022 FunFam Calcium-transporting ATPase 197 325 - -
Lele19g1206 1022 SMART Cation_ATPase_N_a_2 101 178 IPR004014 -
Lele19g1206 1022 FunFam Calcium-transporting ATPase 459 652 - -
Lele19g1206 1022 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 455 657 IPR023299 GO:0000166
Lele19g1206 1022 CDD P-type_ATPase_Ca_PMCA-like 132 884 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1206 Lele-ChrLele19 8091766 8094834 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1206 10 1022 Primary Pumps ATPases AT3G22910 68.793 0.0 1342