Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1205 ATGTCAATGCCCATCGTCAACAATTTGGAGCGGATACAGAAACTTTTGAATTCCCCTCAAAATCTGAGCAAACCCAACAAAAAATGGCATTCTGCTTTCGTTAGCATCTATTGTTCTCGAGCCCTCTTCTCTCACTTCGCTTCCACAATGCTTCTCTCCAACAAGAACAGCTCTAAGTTATCACCTTCTTCCTCCTTCACTGTCATCGATGTAAACACAGATCATTCCTTTTCTATTACTCAAACCACCCTCACCAACGTCATCAAGGACAAAAATGTAGAAATACTGGAAAATCTTGGTGGGGTCCACGGCATGGTATCTGCTCTCAAAACCGACGTTGAAAATGGAGTCAAAGGCGGTGATGGTGATGGTGATGGTGATGGTGATGACGTCATGAGACGCCGCGACGCGTTTGGTTCTAACACTTATCCAAAGCCACCTACGAGAGGTTTCTTCCATTTTGTGATAGAAGGCTTCAAGGACCCCACCATTCTCATTCTCTTGGTTTGTGCCGCTCTCTCTCTTGGCTTCGGCATCAAGGAGAACGGAATCCAAGAAGGCTGGTACGAAGGGGGAAGCATCTTCGTTGCCGTTTTCCTCGTCATTGCTGTCTCTTCCATCAGTAACTTCAGGCAGAGCAGACAGTTCGACAAGCTGTCCCAGGTTAGCAATAACATCCAGGTTGATGTTGTACGAAGTGGTCGCCGACAACAAGTTTCGATTTACGACATCGTGGTCGGTGATGTTGTTTTGCTTAAGATCGGAGACCAAGTTCCTGCGGATGGCTTGTTCTTGGAAGGCCATTCTCTGCAAGTTGATGAGTCAAGCATGACAGGTGAGAGCGACCACGTAGAGATTAATTTCGACAATAACCCATTTTTGTTTTCTGGGACCAAAGTGGCTGATGGGTTCGCCAAAATGCTGGTTACTTCCGTTGGAACGAACACAACATGGGGTCAAATGATGGGTTCCATAAGCAGAGACAACAATGAAGAAACCCCATTGCAAGAACGCCTCAATAAGCTTACTTCTGCCGTAGGCAAGGTTGGTTTGGCTGTGGCATTTCTTGTTCTTCTTGTTATGTTAGTTCGCTACTTCACAGGGAACACAACCGATGAGAACGGGAACAAAGAGTTCAACGGAAGAAGAACGAAGTTTGATGACATAATGAATGGAGTTGTGGGAATTGTTGCCGCTGCTGTTACCATTGTTGTGGTTGCAATTCCAGAAGGGCTTCCTCTGGCTGTGACTCTGACACTTGCTTATTCCATGAAGAAGATGATGGCTGACATGGCTATGGTGAGGAAGCTCTCTGCTTGTGAGACTATGGGCTCTGCTACGACCATTTGTACTGATAAGACTGGCACTCTCACGCTCAATCAGATGAAAGTGACTAAGTTCTGGCTTGGACAACAACCCATGGAAGAGAAACTTCATGAATCATCATCAGTTCATTCAGATGTTCTTCAACTGATCAAAGAAGGGGTTGCCCTAAACACTACAGGTAGTGTTTACAAGACTAAATCAAATGATTCTGAATATGAGTTTTCAGGTAGTCCAACGGAAAAGGCCATTCTTTCATGGGCTGTTCTTGATTTGAACATGAACATGGAGGAATTGACGCAGGGTTGTACCATCCTTCAAGTGGAAGCCTTCAATTCAAAGAAGAAGAGAAGTGGTGTCTTGATTAGAAGGAAAGCAGACAACAGAATCCATGCACACTGGAAAGGAGCAGCTGAGATGGTACTGAGATTATGTTCAAAGTACTATGATGCTTCTGGCAATATCAAAGATCTTGACACCGGAAAAAAGTTGGTGTTTGAGCAAATCATTCAAGGAATGGCGGCCAGCAGCCTCAGGTGTATTGGTTTTGCGCATACAGAAGAAGATGAAGAAGGAACCCAAAAGGTAAAAGAAGAAGGCCTCACACTCTTAGGTCTCGTGGGTATTAAGGATCCATGTCGTCCAGGTGTGAAGAAAGCTGTAAACAATTGCCAACAAGCAGGAGTAAATGTCAAGATGATCACAGGAGACAATGTTTTCACAGCAAAAGCCATAGCCACAGAATGCGGAATCCTCCAACCTAATCAAGACACAACAGAAGCAGTCATCGAAGGAGAAGCATTCCGAAACTTGTCTCCGGAGGAAAGACTAAAGAGAGTGGAGAAAATCTCTGTGATGGCACGATCCTCCCCATTTGACAAGCTCCTCATGGTTCAATCCCTCAAACAGAAAGGCCATGTAGTTGCAGTGACAGGAGATGGCACCAATGATGCACCGGCATTAAAGGAAGCTGACATAGGACTTTCCATGGGGATTCAAGGCACTGAAGTTGCAAAAGAAAGCTCAGATATAGTCATATTGGATGATAATTTCGCCTCGGTCGCCACAGTTCTCAAGTGGGGAAGATGTGTCTATAACAACATCCAAAAGTTCATCCAGTTTCAGCTTACAGTAAATGTTGCAGCTCTTGTAATTAACTTCGTGGCGGCAGTATCAGCAGGAGAAGTGCCGTTAACAGCAGTTCAACTTTTGTGGGTGAACCTGATAATGGACACTTTAGGAGCTTTAGCTCTTGCAACAGAGAAGCCAACAATGGAGTTATTGGACAAACCACCAGTGGGTAGAACTGAACCTCTCATCACCAACATCATGTGGAGAAATCTCTTAGCACAAGCTTTCTACCAGATCACAATTCTGTTAACGTTACAGTTCAAGGGTGAAGATATATTTGGGGTGAGTTCAAAGGTAAATGACACTTTGATTTTCAACACATTTGTGCTGTGTCAGGTGTTTAATGAGTTCAATGCGAGGAAGCTGGAGAAGAAGAATGTGTTCCGGGGGATTCATAAGAACAAGCTGTTCATGGGGATAATAGGGATAACTATAGTGCTTCAGGTGTTGATGGTGGAGTTTCTGAAGAAATTTGCCGATACGGAGAGGTTGAATTGGGGGCAGTGGGGTGTTTGCATTTTAATGGCAGCTATTTCTTGGCCTATTGGTTGGGTTGTGAAGTTCATTCCGGTCCCAAGAAAACCATTGCTCAGTTTCTTCAACATGAGGAGGCAATGA 3072 0.4453 MSMPIVNNLERIQKLLNSPQNLSKPNKKWHSAFVSIYCSRALFSHFASTMLLSNKNSSKLSPSSSFTVIDVNTDHSFSITQTTLTNVIKDKNVEILENLGGVHGMVSALKTDVENGVKGGDGDGDGDGDDVMRRRDAFGSNTYPKPPTRGFFHFVIEGFKDPTILILLVCAALSLGFGIKENGIQEGWYEGGSIFVAVFLVIAVSSISNFRQSRQFDKLSQVSNNIQVDVVRSGRRQQVSIYDIVVGDVVLLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINFDNNPFLFSGTKVADGFAKMLVTSVGTNTTWGQMMGSISRDNNEETPLQERLNKLTSAVGKVGLAVAFLVLLVMLVRYFTGNTTDENGNKEFNGRRTKFDDIMNGVVGIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGQQPMEEKLHESSSVHSDVLQLIKEGVALNTTGSVYKTKSNDSEYEFSGSPTEKAILSWAVLDLNMNMEELTQGCTILQVEAFNSKKKRSGVLIRRKADNRIHAHWKGAAEMVLRLCSKYYDASGNIKDLDTGKKLVFEQIIQGMAASSLRCIGFAHTEEDEEGTQKVKEEGLTLLGLVGIKDPCRPGVKKAVNNCQQAGVNVKMITGDNVFTAKAIATECGILQPNQDTTEAVIEGEAFRNLSPEERLKRVEKISVMARSSPFDKLLMVQSLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELLDKPPVGRTEPLITNIMWRNLLAQAFYQITILLTLQFKGEDIFGVSSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFRGIHKNKLFMGIIGITIVLQVLMVEFLKKFADTERLNWGQWGVCILMAAISWPIGWVVKFIPVPRKPLLSFFNMRRQ 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1205 1023 PRINTS H+-transporting ATPase (proton pump) signature 752 768 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1205 1023 PRINTS H+-transporting ATPase (proton pump) signature 607 625 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1205 1023 PRINTS H+-transporting ATPase (proton pump) signature 784 809 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1205 1023 FunFam Calcium-transporting ATPase 198 326 - -
Lele19g1205 1023 Gene3D - 157 1007 - -
Lele19g1205 1023 MobiDBLite consensus disorder prediction 116 139 - -
Lele19g1205 1023 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 78 1009 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele19g1205 1023 Pfam E1-E2 ATPase 227 428 - -
Lele19g1205 1023 SUPERFAMILY HAD-like 448 857 IPR036412 -
Lele19g1205 1023 Pfam Cation transporter/ATPase, N-terminus 100 174 IPR004014 -
Lele19g1205 1023 SFLD Haloacid Dehalogenase 432 805 - -
Lele19g1205 1023 Gene3D - 460 653 IPR023299 GO:0000166
Lele19g1205 1023 Gene3D - 129 326 - -
Lele19g1205 1023 CDD P-type_ATPase_Ca_PMCA-like 133 885 - -
Lele19g1205 1023 Gene3D - 447 797 IPR023214 -
Lele19g1205 1023 Pfam haloacid dehalogenase-like hydrolase 447 766 - -
Lele19g1205 1023 FunFam Calcium-transporting ATPase 460 653 - -
Lele19g1205 1023 SUPERFAMILY Calcium ATPase, transduction domain A 225 324 IPR008250 -
Lele19g1205 1023 FunFam Calcium-transporting ATPase 769 1011 - -
Lele19g1205 1023 Pfam Cation transporting ATPase, C-terminus 837 1007 IPR006068 -
Lele19g1205 1023 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 658 IPR023299 GO:0000166
Lele19g1205 1023 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 194 367 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1205 1023 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 392 489 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1205 1023 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 723 833 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1205 1023 FunFam Calcium-transporting ATPase 647 797 - -
Lele19g1205 1023 SMART Cation_ATPase_N_a_2 101 179 IPR004014 -
Lele19g1205 1023 SFLD p-type atpase 432 805 IPR044492 -
Lele19g1205 1023 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Lele19g1205 1023 PRINTS P-type cation-transporting ATPase superfamily signature 646 657 - -
Lele19g1205 1023 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Lele19g1205 1023 PRINTS P-type cation-transporting ATPase superfamily signature 273 287 - -
Lele19g1205 1023 PRINTS P-type cation-transporting ATPase superfamily signature 668 678 - -
Lele19g1205 1023 PRINTS P-type cation-transporting ATPase superfamily signature 776 788 - -
Lele19g1205 1023 PRINTS P-type cation-transporting ATPase superfamily signature 752 771 - -
Lele19g1205 1023 MobiDBLite consensus disorder prediction 116 136 - -
Lele19g1205 1023 SUPERFAMILY Calcium ATPase, transmembrane domain M 101 1010 IPR023298 -
Lele19g1205 1023 PANTHER CATION TRANSPORTING ATPASE 65 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1205 Lele-ChrLele19 8074705 8077776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1205 12 1023 Primary Pumps ATPases AT3G22910 68.499 0.0 1337