Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1203 ATGAAAGAAAGCTCGGAGCAGCATCTTGTTATCAAAACCCACTTGCAGAACTCCATAAATCCAGCAAAGAAAGCACCCAAAACGGTCCAAAATGGCAAAGGTCCACCACCTCAAGAACCTCACAACGCCAAACCCCATAGCCAGAGCCAACCTCCGCCCCCGGCAAAGAACAGAGGAAGAAGAAGGAGTCGGGGAGGCCGTAAGTCCGATCAAGGCGATGTTCCGATGCGACCCGCTTGTCGACCCTGCACTGTCGCTAATAAACCGCTATCAGAAAACCCGCGTCAGATTCTGGTATCAAGTACTGTAAATGGGCCGGTTGAAAATGGTGGCAACAACTCCTGTGATGTTGTGATGGGGTTTCCCACCTCAAGTAAATCTTTGAGCTTCGCTCCTAGGCCTGGATACGGACAAGTTGGGACAAAATGCATAGTGAAGGCTAACCATTTCTTTGCAGAGTTACCGGACAAGGACTTGAACCAGTATGATGTCACTATTACCCCAGAAGTGTCTTCTAGAACAGTAAACAGGGCCATCATGGCGGAACTCGTGAGACAGTACAAAGAGTCTGACTTGGGGATGAGACTCCCTGCATATGATGGCAGAAAAGGTCTGTACACAGCAGGGGAGCTTCCCTTTGCTCGGAGAGAGTTTAAAATTAAGCTTGTAGATGAAGACGATGGAGTTAATGGGCCCAAAAGGGAAAGAGAATACCAAGTGGTGATTAAGTTTGTTGCTCGGGCAAACTTGCATCACTTGGGCCAGTTTCTAGCTGGTAAGCGTGCTGATGCTCCACAGGAGGCACTTCAGATTCTTGACATTGTACTAAGAGAGCTATCAAATAAGAGGTTTTGCCCTATTGGGAGGTCCTTCTTTTCACCAGATATTAGAACACCTCAAAGGCTTGGAGAGGGATTGGAATCATGGTGTGGATTTTACCAGAGCATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGATATGGCCTCGGCTGCGTTTATTGAGCCTCTTCCTGTTGTGGAATTTGTTGGTCAGCTGTTAGGAAAAGATGTGTTGTCAAGGCCATTGTCTGATGCTGATCGTGTAAAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAAGTAACTCACAGAGGGAGTGTACGAAGAAAATATCGTGTTTCAGGGTTGACTTCTCAACCAACAAGGGAACTTGTGTTTCCTGTTGATGACAACTCAACTATGAAATCAGTAGTTGAGTACTTCCAAGAGATGTATGGTTTCACTATTCAATATACTCATCTACCTTGCCTTCAAGTAGGAAACCAAAAGAAGGCAAACTATTTGCCTATGGAGGCATGCAAAATTGTTGAGGGGCAACGGTATACAAAAAGGTTGAATGAGAAGCAAATTACTGCTTTGCTGAAAGTTACTTGTCAGAGACCCCGTGATCGGGAAAATGACATTTTGCGGACCATTCAACATAATGCTTATGATCAAGATCCATATGCAAAGGAGTTTGGGATTAAGATCAGTGAAAAATTAGCTTCTGTTGAAGCACGAATTCTTCCTGCCCCATGGTTGAAATATCATGATACTGGGAAAGAAAAGAACTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATCAATGGGATGACTGTTAGCCGGTGGGCATGCATAAATTTTTCACGAAATGTGCAAGATAGTGTTGCTCGCAGTTTTTGTAGTGAACTTGCTCAGATGTGTCAAGTATCTGGCATGGAATTTAATCCAGAGCCTGTTATCCCAATATATAACGCCAAGCCTGAGCAGGTGGAGAAAGCTTTAAAGCATGTTTATCATGTTTCGATGAACAAAACCAAGGGGAAGGAATTAGAGCTTCTATTAGCAATATTGCCTGACAACAATGGCTCTCTTTATGGTGATCTCAAGCGAATTTGTGAAACTGACCTTGGTTTAATTTCTCAATGCTGCCTGACGAAGCATGTCTTTAAGATCACTAAACAGTATCTGGCTAATGTGTCTCTGAAGATCAATGTTAAGATGGGAGGTAGAAACACTGTTCTTCTGGACGCTATAAGCTGCAGAATACCATTGGTTAGTGACATTCCGACCATAATATTTGGAGCAGATGTTACACACCCTGAAAATGGAGAAGATTCCAGTCCCTCAATAGCAGCTGTAGTAGCTTCCCAAGATTGGCCTGAAGTGACTAAATATGCCGGTTTAGTGTGTGCTCAAGCTCACAGACAGGAACTCATTCAAGATTTGTACAAAACTTGGCATGATCCTGTTCGTGGAACAGTCAGCGGTGGCATGATCCGAGACTTGTTGGTCTCCTTTAGAAAGGCAACAGGACAGAAGCCACTAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGGCAATTTTATCAAGTTCTACTTTATGAGTTGGATGCAATCCGGAAGGCTTGTGCTTCCTTAGAACCAAACTATCAGCCTCCAGTAACTTTTATTGTTGTACAAAAAAGACATCACACTAGGTTGTTTGCAAACAACCACAGGGACAAGAGCAGCACAGATAAGAGTGGGAATATATTGCCTGGAACCGTTGTTGATTCTAAAATCTGTCATCCAACAGAATTTGATTTTTATCTCTGCAGTCATGCCGGTATTCAGGGGACGAGTCGGCCTGCTCATTATCATGTCCTGTGGGATGAAAACAACTTCACAGCAGATGGAATCCAGTCTTTGACAAACAATCTATGTTATACATATGCTAGGTGTACCCGTTCCGTATCTGTTGTTCCTCCGGCATATTATGCACATCTAGCCGCATTTCGGGCCCGTTTCTATATGGAGCCAGACATGCAGGAGAATGGCTCTACCGGCGGTGGTAGTGTGGGTCATGGTCCCAAAGCAACCCGAGCAGCTGGAGAATGTGGGGTCCGGCCATTGCCAGCCTTGAAAGAAAATGTGAAGAGGGTAATGTTTTATTGTTAG 2982 0.441 MKESSEQHLVIKTHLQNSINPAKKAPKTVQNGKGPPPQEPHNAKPHSQSQPPPPAKNRGRRRSRGGRKSDQGDVPMRPACRPCTVANKPLSENPRQILVSSTVNGPVENGGNNSCDVVMGFPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRAIMAELVRQYKESDLGMRLPAYDGRKGLYTAGELPFARREFKIKLVDEDDGVNGPKREREYQVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSNKRFCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRVKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTIQHNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHDTGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRNVQDSVARSFCSELAQMCQVSGMEFNPEPVIPIYNAKPEQVEKALKHVYHVSMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTGGGSVGHGPKATRAAGECGVRPLPALKENVKRVMFYC 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1203 993 Pfam PAZ domain 364 468 IPR003100 GO:0005515
Lele19g1203 993 Pfam Piwi domain 627 946 IPR003165 GO:0003676
Lele19g1203 993 CDD PAZ_argonaute_like 337 451 - -
Lele19g1203 993 FunFam Protein argonaute-2 331 457 - -
Lele19g1203 993 Pfam Mid domain of argonaute 535 612 IPR032473 -
Lele19g1203 993 FunFam protein argonaute 10-like 695 993 - -
Lele19g1203 993 Pfam Argonaute linker 2 domain 478 524 IPR032472 -
Lele19g1203 993 SMART DUF1785_2 285 337 IPR014811 -
Lele19g1203 993 MobiDBLite consensus disorder prediction 38 52 - -
Lele19g1203 993 Gene3D - 695 993 IPR036397 GO:0003676
Lele19g1203 993 CDD Piwi_ago-like 496 946 IPR045246 -
Lele19g1203 993 ProSiteProfiles PAZ domain profile. 338 452 IPR003100 GO:0005515
Lele19g1203 993 SMART PAZ_2_a_3 342 474 IPR003100 GO:0005515
Lele19g1203 993 FunFam Argonaute 10 516 689 - -
Lele19g1203 993 Pfam Argonaute linker 1 domain 286 335 IPR014811 -
Lele19g1203 993 Gene3D - 516 689 - -
Lele19g1203 993 MobiDBLite consensus disorder prediction 10 25 - -
Lele19g1203 993 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 120 948 - -
Lele19g1203 993 Pfam N-terminal domain of argonaute 142 276 IPR032474 -
Lele19g1203 993 MobiDBLite consensus disorder prediction 1 92 - -
Lele19g1203 993 ProSiteProfiles Piwi domain profile. 626 947 IPR003165 GO:0003676
Lele19g1203 993 Gene3D paz domain 331 456 - -
Lele19g1203 993 SMART Piwi_a_2 626 947 IPR003165 GO:0003676
Lele19g1203 993 SUPERFAMILY Ribonuclease H-like 616 948 IPR012337 -
Lele19g1203 993 SUPERFAMILY PAZ domain 332 492 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1203 Lele-ChrLele19 8030223 8037745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1203 1 993 Eukaryotic Initiation Factors Gene Family AT5G43810 81.637 0.0 1654