Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1202 ATGAAGCTTCTTCAGTCCGAGGAAACCGCGTCTGAGGCTTGCGACTTTCCTGAGGAAACCCAAGAAGAGAAACCCCCAAGGGCTGATGGCATTGACCGTGGCCTTGATAATGGTGATGCGGTTCTCGATGTCTTTGGGAAAACCGTGGAGTTCCCGGTATTGGAGAACGCAGAAGACTCCATGGAGGGCTTGTATTTTTATAAGAATGTTTACAATTTGATCCCCAAGTCTCTGGGAGGCCTTGCACGGTTGAAGACATTGAAGTTCTTCGGGAACGAGATTAATTTGTTTGCCCCGGAGTCTGGAAACTTGACGGGCTTAGAATGCTTGCAGATGAAGATATCTTCTCCTGGGATTGGTGGGTTGCCATTGCATAAGTTGAAGGCTTTGAAGGAGTTAGAGTTGTCCAAAGTGCCTCCACGGCCTTCTGCTTTTCCTATATTGACCGAGATTTCTGGTCTTAAGTCCTTGACCAAGCTATCTGTTTGCCACTTTTCCATAAGATACCTTCCTCCTGAAATTGGCCTCTTAAAGGAACTGGAGTATCTTGATCTTTCATTCAATAAGATGAAGACATTGCCCTCTGAAATCAGTTATTTGAATGGCTTGATATCTTTGAAAGTTTCCAATAATAAGTTGGTGGAGCTACCATCAACTATGGCCTTGCTGTCTGGGTTGGAGAACTTGGACCTGTCAAATAATAGGTTGACTTCACTGGGGCCTCTTGAACTTGGGTCTATGCATAAACTTCAGAATTTAAATCTTCAGTTCAATAAGCTCTGCAACACACTTCAAATACCTTCATGGATTTGCTGTAATATGGAAGGAAATGACAAAGGTGAATGCAGTGATGATGTTAGCAGTTCTTCTGTTGAAATGGATGTCTATGAAACTAGTTCACTGGAGAATGATGGACTACTTTCACATGCATCTCATAATAGCTCATCAAACCTATTAACTAGCTCCTCGTCTAGCAGCAGATGTTTTGCTACCCGGAAATCAGGTAAAAGGTGGAAGAGGCAGCACTACTTACAGCAGAAAGCCCGTCAAGAGTGCTTAAACAACAGCAGGAAGTGGAAAGGTTTAAATAATTTCCAACTGAGAAAGGATATGCATAGAATTTGTAAATCAGAAAACCAGGGCAATCTTGCTCTTGAAAACTGCAGTGAAGCTCATCCATCAGACAGTACGGGTCAGGATGATGAAGCTAAAAAGATGGTCTCAGAAGAAGCTGGGAATGACAGTGTTATTGATGATGTTAACAATAATGAAGTGGATATTGAAAAGCAGTTTTCTAAGAATTGCTGTTCTAGTGAAAGTGAAGATGAAAAAGATGTTACTAATAAAGATGCTTCCTTATGCCCCTTGGAGAATGGACCTAGTGGGCAGGACAATGCATCAAATTCAGAATCTTTGAAGCATATTTCTAAATCTAAGAGACATTCAGAAAGGTGTCTTGATAATCCTAAACCATGCAAGTCTAGAAAACCAATTGGTGATAGCTCATCATTGTCCTACAAGTACAGTAGATTATCATTTTGTGGCACTGAAGACCATCTGCCAGATGGCTTTTATGATGCTGGACGTGATCGACCTTTTATGACCCTTGAGAGTTATGAGCAAAATCAGTGTCTTGCCTCTCGTGAAGTCATCTTGCTGGACAGAGAAAGGGATGAAGAACTGGATGCCATCACAATCTCTGCTCAGTCATTGGTGTTTCATTTGAAGCAGTTAAATGATTTTACGAAACATGGGAATCAAGCTGCTCTTGATAACTTCCAGGTTGCTTCACTTATTGCACTCTTTGTATCAGATCATTTTGGGGGCTGTGATAGAGGTAATATTGTAGAAAGGACACGAAAATCAGTGTCCGGTTCAAATTATCACAAGCCTTTTGTCTGTACATGCTCAACTGGAAGCAACAGTGATAGTAGTGCTTCCTCTAAACCAGTTGTGAACAGTGTAGAAGACATTACTTTAGCTAATATCTGTGAAAAATCTCTCGAGTCTATAAAAAGAAGACGAAGTTCGATCATAATTCCCATTGGATCTGTGCAGTTTGGTGTGTGTAGACATAGAGCTCTGCTTTTTAAGTACTTATGTGATCGCATGGAGCCTCCAGTACCTTGTGAGCTTGTCAGGGGTTTCTTGGATTTTTCACCACATGCCTGGAACACCATCGTAGTTAACAGAGGTGATAGCCAGGTTAGAATGTTAGTTGATGCATGCCGGCCGCATGATATAAGAGAAGAGGAAGACCCTGAGTTCTTTTGCAGGTATGTACCTCTTAGTCGAACCAAAGTTCCTATTTCCCCTGAGGGAACTGCTGGTTCTAGTTGTTCATTTCCATCTCTGTCTACATGTGACAAATTTGAGAAGGCATCTTCAAGTACTCTAGTTCGGTGCAAATTTGGGTCAATTGAGGCTGCAGCAAAGACCTATCTTGATAAGTTATCAAAAGCTGGTGAAAAGCACCTGCCCATGAAGCTGGCTTTTTATATTGCCAAAGATGTTGCGTGTGCATTGTCAGAGCTGCACTCGAAGCACATAATTCATCGTGATGTGAAAAGTGAAAACATTCTGATTGCTTTGGATAGAAAGAAAGATGATGGCACCCCTATTGTGAAGCTTTGTGATTTTGACAGTGCAGTGCCACTAAGATCACCTTTGCATAGCTGCTGTATTGCTCATGTGGGAACACCTCCTCCTTATGTTTGCACTGGAACACCACGATGGATGGCTCCGGAGGTTATGCGGGCTATGTATAAAGAAAATGCTTATGGATTGGAAGTTGATATCTGGTCATTTGGGTGCTTACTTGTGGAGCTTCTCACACTGCGTATTCCATATTCTGGGCTATCTGATTTACAATTCCATGACATTTTACAGATGGGTAAACCACCAGAGTTAACCGAAGAACTGGAGGCCCTTAGTTCTCTGAACAAACCCACGACGATTCGATCCAGTGATGAGCCAGAAAAACCAGATACTGAGGTAGACACGATGAAATTCCTTGTTGATTTGTTTCATAGGTGTGTCGACGACAATCCAGCCAAACGGCCTACAGCGAAAGAAATCTATGACATGCTGCTTGAACAAACAGGTCGTCTAAAAGTACAAGATGTTGGGAAGAGTTAG 3138 0.421 MKLLQSEETASEACDFPEETQEEKPPRADGIDRGLDNGDAVLDVFGKTVEFPVLENAEDSMEGLYFYKNVYNLIPKSLGGLARLKTLKFFGNEINLFAPESGNLTGLECLQMKISSPGIGGLPLHKLKALKELELSKVPPRPSAFPILTEISGLKSLTKLSVCHFSIRYLPPEIGLLKELEYLDLSFNKMKTLPSEISYLNGLISLKVSNNKLVELPSTMALLSGLENLDLSNNRLTSLGPLELGSMHKLQNLNLQFNKLCNTLQIPSWICCNMEGNDKGECSDDVSSSSVEMDVYETSSLENDGLLSHASHNSSSNLLTSSSSSSRCFATRKSGKRWKRQHYLQQKARQECLNNSRKWKGLNNFQLRKDMHRICKSENQGNLALENCSEAHPSDSTGQDDEAKKMVSEEAGNDSVIDDVNNNEVDIEKQFSKNCCSSESEDEKDVTNKDASLCPLENGPSGQDNASNSESLKHISKSKRHSERCLDNPKPCKSRKPIGDSSSLSYKYSRLSFCGTEDHLPDGFYDAGRDRPFMTLESYEQNQCLASREVILLDRERDEELDAITISAQSLVFHLKQLNDFTKHGNQAALDNFQVASLIALFVSDHFGGCDRGNIVERTRKSVSGSNYHKPFVCTCSTGSNSDSSASSKPVVNSVEDITLANICEKSLESIKRRRSSIIIPIGSVQFGVCRHRALLFKYLCDRMEPPVPCELVRGFLDFSPHAWNTIVVNRGDSQVRMLVDACRPHDIREEEDPEFFCRYVPLSRTKVPISPEGTAGSSCSFPSLSTCDKFEKASSSTLVRCKFGSIEAAAKTYLDKLSKAGEKHLPMKLAFYIAKDVACALSELHSKHIIHRDVKSENILIALDRKKDDGTPIVKLCDFDSAVPLRSPLHSCCIAHVGTPPPYVCTGTPRWMAPEVMRAMYKENAYGLEVDIWSFGCLLVELLTLRIPYSGLSDLQFHDILQMGKPPELTEELEALSSLNKPTTIRSSDEPEKPDTEVDTMKFLVDLFHRCVDDNPAKRPTAKEIYDMLLEQTGRLKVQDVGKS 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1202 1045 Pfam Ethylene-responsive protein kinase Le-CTR1 660 741 - -
Lele19g1202 1045 Gene3D Transferase(Phosphotransferase) domain 1 810 1034 - -
Lele19g1202 1045 SUPERFAMILY RNI-like 64 263 - -
Lele19g1202 1045 Gene3D Ribonuclease Inhibitor 46 284 IPR032675 -
Lele19g1202 1045 ProSiteProfiles Protein kinase domain profile. 676 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1202 1045 MobiDBLite consensus disorder prediction 1 33 - -
Lele19g1202 1045 MobiDBLite consensus disorder prediction 388 423 - -
Lele19g1202 1045 MobiDBLite consensus disorder prediction 440 502 - -
Lele19g1202 1045 MobiDBLite consensus disorder prediction 395 412 - -
Lele19g1202 1045 MobiDBLite consensus disorder prediction 473 494 - -
Lele19g1202 1045 ProSiteProfiles Leucine-rich repeat profile. 179 200 IPR001611 GO:0005515
Lele19g1202 1045 SMART LRR_bac_2 200 219 - -
Lele19g1202 1045 SMART LRR_bac_2 223 242 - -
Lele19g1202 1045 SMART LRR_bac_2 177 196 - -
Lele19g1202 1045 PRINTS Leucine-rich repeat signature 180 193 - -
Lele19g1202 1045 PRINTS Leucine-rich repeat signature 223 236 - -
Lele19g1202 1045 FunFam Leucine-rich repeat protein kinase family protein 796 1036 - -
Lele19g1202 1045 FunFam Leucine-rich repeat protein kinase family protein 50 293 - -
Lele19g1202 1045 ProSitePatterns Serine/Threonine protein kinases active-site signature. 850 862 IPR008271 GO:0004672|GO:0006468
Lele19g1202 1045 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 107 1034 - -
Lele19g1202 1045 SMART serkin_6 764 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1202 1045 Pfam Leucine rich repeat 203 260 IPR001611 GO:0005515
Lele19g1202 1045 SUPERFAMILY Protein kinase-like (PK-like) 816 1030 IPR011009 -
Lele19g1202 1045 MobiDBLite consensus disorder prediction 458 472 - -
Lele19g1202 1045 SMART LRR_sd22_2 177 202 - -
Lele19g1202 1045 SMART LRR_sd22_2 223 244 - -
Lele19g1202 1045 SMART LRR_typ_2 81 104 IPR003591 -
Lele19g1202 1045 SMART LRR_typ_2 177 200 IPR003591 -
Lele19g1202 1045 SMART LRR_typ_2 247 273 IPR003591 -
Lele19g1202 1045 SMART LRR_typ_2 223 246 IPR003591 -
Lele19g1202 1045 MobiDBLite consensus disorder prediction 17 33 - -
Lele19g1202 1045 Pfam Protein kinase domain 812 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1202 1045 ProSiteProfiles Leucine-rich repeat profile. 225 246 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1202 Lele-ChrLele19 8004540 8012799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1202 818 1030 MAP Kinase Kinase Kinase AT2G24360 30.047 5.09e-21 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Lele19g1202 Pkinase 8.5e-32 CL0016