Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1190 ATGAACGCCGGCCCCGCCACCTTCCGCTCCATTCTCGACAAACCCCTCAGTCAGCTCACGGAGGATGACATTTCCCAGCTCACCCGCGAAGATTGTCGCAGGTTCCTCAAAGAAAAAGGAATGCGTCGGCCTTCTTGGAACAAATCGCAGGCGATCCAGCAAGTTATTTCCCTCAAAGCTTTGCTCGACCCGGCTGACGACGATTCCGGCGCCGGACCCATACGGAGATTCCCTTTTGTTTCAGCTCAAGAAAATACCCCACCCGATAATACAGATGTGACTGGTAGTGGCAGTGGCGGCGTCGTCGCCGGAGTTGAGGCGACATCGATTGGGCAGACTGAAGAGCCGGCTTTCCATGCTGCCGAAGAGCTTAACAAATCTGTGTCATCTGGAGAGAAACCAACCAACATTGAAACGAATGAGAAGGTCGTCTGTCCCAGAGAGTGTGCAACTAGTGGGCCTGTTGGGCAAATGACAATTTTCTATTGTGGTAAGGTGAATGTGTATGATGGGGTGCCACCTGATAAGGCACGGACAATCATGCAGCTTGCAGCAAGTCCCATCTATATACCTAAAGACGAACCATTCAAAAGAAATACATCAGTCTGGCCTTGTCATTTACAGACGGATAAAGATACCCTTGTCCCAATTGACGGCACAATCTCTCAGTTTGCTCAAGCAGATAAGATGGTGGAGTATCCTTTGCATTACAGGGAGAAAGGGAGCACAGCTCGTGATTCTGATGGTCAGGCTAGCAGGAAAGTGTCATTGCAGCGATATTTAGAAAAGCGAAAGGACAGGGGAAGATTAAAGAGCAAGAAATTTACGGGAGTAACTTCTTCTAACATGGAAATGTATTTCAGTCATCAAGTGAAGGCCCATGGCTCAAATGGGAATTCAAGCCGTAGTAGCACAAGCTCTCCGCCACAGCCAAGGCTGCCTCAAGCTTCCGGTGGCTCAGCTGACAACCAGACAAAGATTGGCCTTCCTGTTGATCTCAATCACAAAGGTAAGCTATGA 1020 0.4922 MNAGPATFRSILDKPLSQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLDPADDDSGAGPIRRFPFVSAQENTPPDNTDVTGSGSGGVVAGVEATSIGQTEEPAFHAAEELNKSVSSGEKPTNIETNEKVVCPRECATSGPVGQMTIFYCGKVNVYDGVPPDKARTIMQLAASPIYIPKDEPFKRNTSVWPCHLQTDKDTLVPIDGTISQFAQADKMVEYPLHYREKGSTARDSDGQASRKVSLQRYLEKRKDRGRLKSKKFTGVTSSNMEMYFSHQVKAHGSNGNSSRSSTSSPPQPRLPQASGGSADNQTKIGLPVDLNHKGKL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1190 339 SMART tify_2 151 186 IPR010399 -
Lele19g1190 339 MobiDBLite consensus disorder prediction 292 339 - -
Lele19g1190 339 Pfam Jas motif 250 267 IPR018467 -
Lele19g1190 339 MobiDBLite consensus disorder prediction 292 324 - -
Lele19g1190 339 Pfam tify domain 157 185 IPR010399 -
Lele19g1190 339 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 284 IPR040390 -
Lele19g1190 339 ProSiteProfiles Tify domain profile. 151 186 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1190 Lele-ChrLele19 7899760 7904247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1190 1 337 Tify Gene Family AT4G14720 45.634 7.69e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele19g1190 tify 5.2e-16 No_clan