Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1181 ATGGCTTCTCTTCTTCTTCAACATCATCATCACCGTCTTCTTCATTTACCATTCTCTGTTATCTTCTTCCTCATTTTTCTTCTCTCCATTATCAATACTTCTCACCAAGCTTCTTCTTCTTCTTCTAATGTCACCGTCCCATTAAACCCTCGACTCATCAAAGCTTACTATGCTCTTCAAGCATGGAAGCATTCCATCACTTCTGATCCTAAGAACTTCACCTCCAACTGGTACGGCTACCATGTCTGCAACTACAACGGCGTTTACTGTGCGCCGGCCCCCGACGACCCCCACATCTACACCGTCGCCGGCATCGACCTCAACCACGGCAACATCTCCGGTTCCCTGCCCGAAGACCTTGGTCTTCTCACTGACCTTGCTCTCTTCCACCTCAACTCTAACCGATTCTGTGGGACCCTCCCTCAGAGCTTCCGTAATCTTCATCTTCTTCATGAGCTTGACGTCAGTAATAACCAGTTCTCCGGTCCGTTCCCCGAAGTCATTTTGTGTCTCCGTTCGTTGAAGTTCTTGGACATTAGGTTCAACTCGTTCCTTGGCAAGGTCCCCTCCGATCTCTTTGAGCTCAAACTTGATGCCGTTTTCATAAACGACAACAAGTTTCAGTTCTTGTTGCCGGAGAATCTCGGGAAATCTCCGGTGTCTGTGTTGGTCTTTGCGAATAATAATCTGAACGGTTGTGTTCCGTCGAGCTTGGGAAAAATGAAGGGCACGCTTAATGAGATTATCATTTCTAACAGTGGATTAAAGGGTTGTTTGCCTGAGGAGATTGGTAAATTGGATCAAGTTACAGTGTTTGATGTGAGTGGTAATAAGTTGGTCGGGACGTTGCCAGAATCTATTGAGGGGATGGAGAAGTTGGAGCAGTTGAATGTGGCGCATAATGAGCTCTCCGGCGAGATTCCGGCTAGTGTGTGCTCGTTGCCGAGGTTGCAGAATTTCACGTACTCTTATAATTACTTCTGCAGTGAACCACATATCTGCCTGAAGTTGCCAGCGGAAGATGACCGGAAAAATTGCATTCCGTACCGGCCGATGCAGAGGTCAGAAATGGAATGTAAAGCTTTTTATGCTCACCCTGTTGATTGTGGTGCCTTTGGATGCTCAAGGCGGCCGCCTCCGCCTCCGCCTCCGCCTCCGCCTCCGCCTCCTCCCCCTCCATCACCGCCTCCGCCTCCTCCTCCTCCACCACCTCCTCCTCCTCCGGCGGTTCACCATTATTATCCGTGA 1248 0.4936 MASLLLQHHHHRLLHLPFSVIFFLIFLLSIINTSHQASSSSSNVTVPLNPRLIKAYYALQAWKHSITSDPKNFTSNWYGYHVCNYNGVYCAPAPDDPHIYTVAGIDLNHGNISGSLPEDLGLLTDLALFHLNSNRFCGTLPQSFRNLHLLHELDVSNNQFSGPFPEVILCLRSLKFLDIRFNSFLGKVPSDLFELKLDAVFINDNKFQFLLPENLGKSPVSVLVFANNNLNGCVPSSLGKMKGTLNEIIISNSGLKGCLPEEIGKLDQVTVFDVSGNKLVGTLPESIEGMEKLEQLNVAHNELSGEIPASVCSLPRLQNFTYSYNYFCSEPHICLKLPAEDDRKNCIPYRPMQRSEMECKAFYAHPVDCGAFGCSRRPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPAVHHYYP 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1181 415 Gene3D Ribonuclease Inhibitor 217 340 IPR032675 -
Lele19g1181 415 Gene3D Ribonuclease Inhibitor 55 216 IPR032675 -
Lele19g1181 415 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 408 - -
Lele19g1181 415 SUPERFAMILY L domain-like 56 337 - -
Lele19g1181 415 MobiDBLite consensus disorder prediction 374 415 - -
Lele19g1181 415 FunFam Leucine-rich repeat extensin-like protein 1 56 217 - -
Lele19g1181 415 MobiDBLite consensus disorder prediction 375 415 - -
Lele19g1181 415 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 235 330 - -
Lele19g1181 415 Pfam Leucine rich repeat N-terminal domain 57 90 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1181 Lele-ChrLele19 7801835 7803082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1181 49 374 Leucine-rich Repeat extension Gene Families AT3G22800 68.502 1.17e-159 456