Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1178 ATGAAGGATTCGGTAGACGGTGTTGGAACACCAAAGATGGATTCGGAAGAAGGAGCTCTGGATTCCAAGATGAAAGGTGTTGGAAATGTTAGCAGTAATGATAAAATTTTCAGAGCTGATAAAATTGATCTCAAAAGTTTGGATGCTCAGCTTGATAAGCACTTAAGTAGGGTTTGGTCGAAGAACATTGATTCCAAAAGGCCTAAAGAAGAGTGGGAGATTGATTTGGCCAAATTGAATCTACGATATGTTGTAGCTCATGGGACCTATGGTACTGTTTACAGAGGCACCTATGATAACCAAGATGTTGCAGTGAAAGTTTTGGACTGGGGTGATGATGGTGTCGCCACAGCCGCTGAAACTGCGGCTTTACGCACATCATTTCGGCAGGAGGTTGCTGTTTGGCGAAAACTTAACCATCCAAATGTTACAAAATTTGTGGGAGCTTCAATGGGAACCTCAAATCTTAAGATTCCCACAAAGAACTCTTCAAGTGAAGTTCAAGATTCCCATCCTTCTAGGGCATGTTGTGTTGTTGTTGAGTATATCCCCTGTGGGACACTAAAACAATTATTATTCAAACAAAGATATAAGAAACTTGCTTTCAAGGTTGTGATCAAGCTGGCATTAGATCTTGCTAAGGGTCTTAGCTATCTACATTCAAAGAAGATTGTACACCGTGACGTTAAAGCAGAGAATATGTTACTAGATGGCAAGGGAAACTTGAAAATAGCCGATTTTGGAGTCGCACGAGTTGAAGCACAAAATCCTAGTGACATGACTGGTGAAACTGGAACCCTTGGATATATGGCACCTGAGGTTCTGGATGGTAAGCCTTACAACAGAAGATGTGATGTGTACAGCTTTGGCATTTGCTTGTGGGAAATATATTGCTGTGATATCCCTTATCCAGATCTTAGCTTTGCTGACGTGTCATCGGCAGTTGTCCGTCAGAATTTGCGACCGGAAATCCCTCGGTGTTGTCCGACATCTTTGGCAAACATCATGAGGAAGTGCTGGGATGGGAACCCAGACAAGCGTCCAGAAATGGATGAGGTGGTGAGTTTGTTGGAAGCCATAGATACAAGCAAAGGGGGAGGAATGATACCAGAAAATGCCACACCCACCTGCTTCTGTTTTGCTCCATCTCGTGGTCCTTAA 1161 0.4307 MKDSVDGVGTPKMDSEEGALDSKMKGVGNVSSNDKIFRADKIDLKSLDAQLDKHLSRVWSKNIDSKRPKEEWEIDLAKLNLRYVVAHGTYGTVYRGTYDNQDVAVKVLDWGDDGVATAAETAALRTSFRQEVAVWRKLNHPNVTKFVGASMGTSNLKIPTKNSSSEVQDSHPSRACCVVVEYIPCGTLKQLLFKQRYKKLAFKVVIKLALDLAKGLSYLHSKKIVHRDVKAENMLLDGKGNLKIADFGVARVEAQNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDIPYPDLSFADVSSAVVRQNLRPEIPRCCPTSLANIMRKCWDGNPDKRPEMDEVVSLLEAIDTSKGGGMIPENATPTCFCFAPSRGP 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1178 386 SMART serkin_6 79 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1178 386 FunFam Kinase suppressor of Ras 1 68 163 - -
Lele19g1178 386 PRINTS Tyrosine kinase catalytic domain signature 218 236 IPR001245 GO:0004672|GO:0006468
Lele19g1178 386 PRINTS Tyrosine kinase catalytic domain signature 180 193 IPR001245 GO:0004672|GO:0006468
Lele19g1178 386 PRINTS Tyrosine kinase catalytic domain signature 328 350 IPR001245 GO:0004672|GO:0006468
Lele19g1178 386 PRINTS Tyrosine kinase catalytic domain signature 284 306 IPR001245 GO:0004672|GO:0006468
Lele19g1178 386 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 57 360 - -
Lele19g1178 386 SUPERFAMILY Protein kinase-like (PK-like) 64 357 IPR011009 -
Lele19g1178 386 FunFam Serine/threonine-protein kinase HT1 183 368 - -
Lele19g1178 386 MobiDBLite consensus disorder prediction 1 21 - -
Lele19g1178 386 MobiDBLite consensus disorder prediction 1 26 - -
Lele19g1178 386 Pfam Protein tyrosine and serine/threonine kinase 81 357 IPR001245 GO:0004672|GO:0006468
Lele19g1178 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Lele19g1178 386 CDD STKc_MAP3K-like 85 357 - -
Lele19g1178 386 ProSiteProfiles Protein kinase domain profile. 79 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1178 386 Gene3D Phosphorylase Kinase; domain 1 68 162 - -
Lele19g1178 386 Gene3D Transferase(Phosphotransferase) domain 1 185 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1178 Lele-ChrLele19 7758750 7762530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1178 28 386 MAP Kinase Kinase Kinase AT3G22750 78.333 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele19g1178 PK_Tyr_Ser-Thr 1.3e-58 CL0016