Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1138 ATGGCGAATCATTTCCAGAACGGTATTGAAACGGCGAAGCTCGTTTGGTCGCGAATTCCGAACTCGGAGGAATCCCAGGATCCTGACGACTCCGTTGGCTTGTTGAAAAAGAGTGATGGAAGCGGCGTTGAGAGCCTTGACTATGAAGTCATAGAGAATTATGCTTATCGGGAAGAACAGGCGCTAAGAGGGAAGCTGTATGTGGGCTATTTGTTGGTGGTGAAATGGTTCTTTGCTTTGCTCATAGGCATTGGTACTGGAATTGCTGCTGTTTTCATCAATATTTCTGTTGAAAACTTTGCTGGCTGGAAGTTTTCATTGACATTTCATATCATTCAGAAATCCTATTTGGCGGGCTTTCTTGTTTATGTCCTGATCAACTTGGTTTTGGTCTATTCATCTGTATATATTATCACACAATTTGCTCCAGCAGCAGGTGGATCTGGTATTCCTGAAATTAAGGGTTACTTGAATGGAGTTGATATTCATGGCATCCTTCTTCTCAGAACGTTGATTGGAAAGATATTTGGAAGCATTGGTTCAGTGGGAGGTGGCCTTGCTTTAGGTAAAGAAGGCCCTCTTGTGCATACTGGTGCTTGTATTGCTTCTTTGCTTGGACAAGTAACCTGTGGGTGTGCGGCTGGAGTAGCTGCTGCATTTAGAGCTCCAGTTGGTGGTGTTTTGTTTGCATTGGAAGAGGTAACATCTTGGTGGAGGAGTCAACTGATGTGGCGTGTCTTCTTCACTTCTGCTGTTGTGGCTGTTGTGGTGCGTACTGCAATGGGGTGGTGCAAGAGTGGGAAGTGTGGACATTTTGGCTCTGGTGGATTCATCATTTGGGATATATCAGGTGGTCAAGAGGATTATTCCTTTGCTGAGTTACTGCCAATGGCTGTTATTGGGGTTATTGGAGGACTGCTAGGAGCCTTGTTTAACCAGCTTACTCTTTATGTGACTTCTTGGCGTCGAAATCATCTGCACAAGAAAGGGGGCCGAGTCAAGATCGTTGAAGCATGCCTTGTCTCCTTCTTAACTTCAGTTATTTCATTTGGTTTGCCACTCCTAAGAAAATGTAGTCCGTGCCCTGAATCTGATCCTCATTCTGATTCTATTATTGAATGCCCTCGACCACCTGGAATGTATGGAAATTATGTAAATTTCTTCTGTAGCAAAGACAAGGAATACAATGATCTTGCCACAATTTTCTTCAATACACAGGATGACGCCATAAGAAATTTGTTTAGTGCAAAAACAATACATGAGTACAGTCTCCAAAGTTTATTGACCTTTTTGGTTATGTTTTATACTCTAGCAGTTGTAACATTTGGTACTGCAGTTCCAGCTGGTCAATTTGTTCCTGGAATTATGATAGGATCAACATATGGACGCCTTGTTGGCATGCTTGTTGTAAAATATTACAGAAAGCTCAACATTGAAGAGGGGACGTATGCTTTATTGGGAGCTGCATCTTTTCTTGGTGGTTCAATGCGAATGACAGTGTCTCTCTGTGTCATTATGGTTGAAATAACAAATAACTTAAAACTCTTACCTCTTATTATGCTTGTTCTCCTTATATCCAAGGCTGTCGGTGATGCTTTTAACGAGGGCTTATATGAAGAGCAGGCACGACTAAAGGGAATTCCATTGCTGGAATCAAGGCCTAAATATGAGATGCGGAATATGACAGCAAAGGAGGCCTGTGGGAGCAGAAGGGTGGTTTCTTTCCCTCGTGTTGTCAAGGTTGCAGATGTAGTTTCCATTCTGCGGAGCAATGATCACAATGGTTTTCCTGTCATTGATCACACAAGAAGTGGGGAATCACTTGTTATTGGATTAGTGCTTCGGAGTCATCTATTGGTAATTCTACAGTCAAAGGTTGATTTCCAGCATATTCCTATACCTGGTGATACTAGAGGCGCGACCAACCCAATAAGGCATCATTCTGATGAATTCACAAAGCCTGTTTCTAGTAAAGGAATCCGTATAGATGATATACATCTAAGTTCAGATGACTTAGAAATGTACATAGATCTTGCCCCATTTTTGAACCCCTCACCATATATTGTACCCGAGGATATGTCTTTGACAAAGGTCTACAATCTTTTCCGCCAACTAGGTTTGAGGCATGTATTTGTTGTTCCTCGCCCATCACGTGTTCTTGGTTTGATAACCAGAAAAAATCTGTTGATTGAGGACACCGAAGATGTGAATACAATATCACTCCAGTCAACTAGCATAATGTCTTTATGA 2250 0.4209 MANHFQNGIETAKLVWSRIPNSEESQDPDDSVGLLKKSDGSGVESLDYEVIENYAYREEQALRGKLYVGYLLVVKWFFALLIGIGTGIAAVFINISVENFAGWKFSLTFHIIQKSYLAGFLVYVLINLVLVYSSVYIITQFAPAAGGSGIPEIKGYLNGVDIHGILLLRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRTAMGWCKSGKCGHFGSGGFIIWDISGGQEDYSFAELLPMAVIGVIGGLLGALFNQLTLYVTSWRRNHLHKKGGRVKIVEACLVSFLTSVISFGLPLLRKCSPCPESDPHSDSIIECPRPPGMYGNYVNFFCSKDKEYNDLATIFFNTQDDAIRNLFSAKTIHEYSLQSLLTFLVMFYTLAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMLVVKYYRKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPLIMLVLLISKAVGDAFNEGLYEEQARLKGIPLLESRPKYEMRNMTAKEACGSRRVVSFPRVVKVADVVSILRSNDHNGFPVIDHTRSGESLVIGLVLRSHLLVILQSKVDFQHIPIPGDTRGATNPIRHHSDEFTKPVSSKGIRIDDIHLSSDDLEMYIDLAPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHVFVVPRPSRVLGLITRKNLLIEDTEDVNTISLQSTSIMSL 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1138 749 CDD CBS_pair_voltage-gated_CLC_euk_bac 569 729 - -
Lele19g1138 749 ProSiteProfiles CBS domain profile. 568 628 IPR000644 -
Lele19g1138 749 Gene3D - 558 735 IPR046342 -
Lele19g1138 749 Pfam CBS domain 570 622 IPR000644 -
Lele19g1138 749 Pfam CBS domain 683 729 IPR000644 -
Lele19g1138 749 Pfam Voltage gated chloride channel 133 530 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele19g1138 749 MobiDBLite consensus disorder prediction 21 40 - -
Lele19g1138 749 FunFam Chloride channel protein 674 748 - -
Lele19g1138 749 PRINTS Chloride channel signature 143 160 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele19g1138 749 PRINTS Chloride channel signature 481 497 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele19g1138 749 PRINTS Chloride channel signature 446 466 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele19g1138 749 PRINTS Chloride channel signature 174 193 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele19g1138 749 PRINTS Chloride channel signature 537 551 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele19g1138 749 PRINTS Chloride channel signature 499 518 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele19g1138 749 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 208 733 - -
Lele19g1138 749 SUPERFAMILY Clc chloride channel 53 552 IPR014743 -
Lele19g1138 749 SMART cbs_1 571 623 IPR000644 -
Lele19g1138 749 SMART cbs_1 685 733 IPR000644 -
Lele19g1138 749 PRINTS Plant CLC chloride channel signature 398 414 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele19g1138 749 PRINTS Plant CLC chloride channel signature 49 57 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele19g1138 749 SUPERFAMILY CBS-domain pair 555 729 IPR046342 -
Lele19g1138 749 Gene3D Clc chloride channel 69 551 - -
Lele19g1138 749 ProSiteProfiles CBS domain profile. 682 739 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1138 Lele-ChrLele19 7454894 7463400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1138 1 749 Ion Channels AT5G26240 80.000 0.0 1173