Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1120 ATGGCTCCTTCTTCTTCTTCTTCTTCCTTGTCCATAATAAAACCAGTTCTGTGTTTCATTGTGTTGTTCTTGGCAACATGCCCTAGTTATGTTCTTGGTACCATCAAGCTTAAGGATTTAGTCATAGATTCTCCTCTATTAACCAAAAACATTCCTGCGAATCGAACGATTAAGGTCGACGATGATGGCAATGGCGATTTCAGATCCATTCAAGCCGCCATAGATTCTGTACCTGAAGGGAATTCTCAGTGGGTCATCATCCACATTAGGAAAGGAGTATACAGAGAGAAGGTGACGATACCAAAGAGCAAGCCGAATATATTCTTGAGAGGAAATGGGAGAGGGAGGACTGGTATAGTTTGGTCCCAGAGTTCTGTTAATAATATTGAGTCTGCAACTTTCAAAGTCGAAGCTCATAACGTCGTTGTCTTTGGACTCAGCATCAAGAACGAGGCACCTACCGGGGTAGCTTACACATCGCAGAATCAATCAGTGGCAGTATTTGTAGGAGCAGATAAGGTTGCATTCTATCACTGTGCATTCTATAGCACTCACAACACTCTCTTTGATTACAAAGGCAGACATTACTACGATGAATGCTACATTCAAGGCTCTATTGATTTCATCTTCGGCCGTGGCAAATCTCTCTTCCATAAATGTGAGATATTTGTGATAGGTGACAAGAGGACAGTGATACAAGGGTCAATCACAGCACAAAATAGGGAGTCAGCAACAGAGGAAAGTGGGTTTGTGTTTGTGAAGGGGAAGGTATATGGCATTGGAGGCGTGTACTTAGGAAGAGCCAAGGGTTCTCATTCAAGGGTCATCTTTGCCAAAGCCTATCTCTCTGCCACCATTGTTCCCTTGGGCTGGGCCCACTGGAGTTACGCCGGCTCCACCGAGAACTTATACCATGGGGAGTACAAGAACTTTGGACCTGGAGCTAATACAACAAAACGAGCCAGTTGGGCCAAACAGATTACTGACAAAGAATTCGACGCCTTCATGTCTGTCGATTTCATTGATGGCAAGGATTGGCTTCCTGCTTGGATATAA 1056 0.4413 MAPSSSSSSLSIIKPVLCFIVLFLATCPSYVLGTIKLKDLVIDSPLLTKNIPANRTIKVDDDGNGDFRSIQAAIDSVPEGNSQWVIIHIRKGVYREKVTIPKSKPNIFLRGNGRGRTGIVWSQSSVNNIESATFKVEAHNVVVFGLSIKNEAPTGVAYTSQNQSVAVFVGADKVAFYHCAFYSTHNTLFDYKGRHYYDECYIQGSIDFIFGRGKSLFHKCEIFVIGDKRTVIQGSITAQNRESATEESGFVFVKGKVYGIGGVYLGRAKGSHSRVIFAKAYLSATIVPLGWAHWSYAGSTENLYHGEYKNFGPGANTTKRASWAKQITDKEFDAFMSVDFIDGKDWLPAWI 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1120 351 Pfam Pectinesterase 57 343 IPR000070 GO:0030599|GO:0042545
Lele19g1120 351 ProSitePatterns Pectinesterase signature 2. 202 211 IPR033131 -
Lele19g1120 351 Gene3D - 51 350 IPR012334 -
Lele19g1120 351 FunFam Pectinesterase 51 351 - -
Lele19g1120 351 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 49 347 - -
Lele19g1120 351 SUPERFAMILY Pectin lyase-like 52 349 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1120 Lele-ChrLele19 7331923 7334675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1120 45 347 Carbohydrate Esterase AT5G07430 39.542 1.37e-69 220