Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1113 ATGGAGGGGAATCGCAAGAGAGAACCAACTTCTTCTTCTTCTTCTGCCATGCCAACGACATTTTCTGATGAGGTTCTGATAAACCAAGCTCCTGTTTTCTCCACCTTCTTCGAAACGTCACCGTTTGTGTCATACGAGCATCGTCATCATCAACATCAACCTAACGAAAAGACTAGTAATTGTAATTCCTTTGGGTTCATGGACTTGCCGGGTGTGCAAGATTACGGTACCCCTTCTTTGTTCGATTGGCTTCCGGCCACCACCACAGCCACGCCATCGTCCGTCGCAGCTGATTTATCCCACCACCAGTCCCTCCCGTCGCCGGCGAGCTCAGGCGGGGTGCTGAACACTACTCCGGCGTCCCCAAATTCCTGCTCGCTTTCGTCCTCGTCCAACGACGCGACCGCCGCAGCCGCCAGCGCCGGCGGCAGTGTGGAGGAAGAACAGCAGAGTAGTAAAGCAGAGGATGAAGATGTAGACGGAGGAAGAGGAGGAAACGACCAAGAAGAAGACAAATCTAAGGAACAGGTGAAACCAAAAAAGAAGAAACAGAAGAAGGAAAAAGAGCCAAGATTTGCGTTCATGACGAAAAGTGAAGTTGATCAGCTCGACGATGGCTATCGATGGCGTAAGTACGGCCAAAAAGCTGTCAAGAACAGCCCTTTTCCCAGGAGTTATTATAGATGTACGACGGTTGGTTGCGGGGTGAAGAAGAGGGTGGAGCGGTCATCGGACGACCCTACCATCGTGGTGACGACTTACGAAGGGCAGCACAAGCATCAGAGTCCGGCGGTGGCGACTCGGGCCGGCCTAGGGTACGGGTATGGCGGGGGCGGCGGTTTTGGTTCAGCGAACTTGGTGGTTCCACAGGGTTATAATCATCATCATCAGTTTCAGCAGCAGAGCATGATGAATAATATTGTGTCGCCGTCTTCTTCTTCAACGCCATTGTTGTATAGGTCAAGCTCACCAACATTGAGCAATATTATTGGATGTAGCAGCTACCCGAATATGAACTCATCATCGACGACGTCGTTTTTGAGCTCGTACCTTGAGAACCATAACAGATCTAGAATAATGGATGAAGCTAGTTTGTTAAGAGACAATGGGCTTCTTCAAGACATTATCGTACCGTCGCAGATGATGCTGAACGAGCACGAAAAGCTGTGA 1170 0.5026 MEGNRKREPTSSSSSAMPTTFSDEVLINQAPVFSTFFETSPFVSYEHRHHQHQPNEKTSNCNSFGFMDLPGVQDYGTPSLFDWLPATTTATPSSVAADLSHHQSLPSPASSGGVLNTTPASPNSCSLSSSSNDATAAAASAGGSVEEEQQSSKAEDEDVDGGRGGNDQEEDKSKEQVKPKKKKQKKEKEPRFAFMTKSEVDQLDDGYRWRKYGQKAVKNSPFPRSYYRCTTVGCGVKKRVERSSDDPTIVVTTYEGQHKHQSPAVATRAGLGYGYGGGGGFGSANLVVPQGYNHHHQFQQQSMMNNIVSPSSSSTPLLYRSSSPTLSNIIGCSSYPNMNSSSTTSFLSSYLENHNRSRIMDEASLLRDNGLLQDIIVPSQMMLNEHEKL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1113 389 Gene3D WRKY domain 190 256 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele19g1113 389 MobiDBLite consensus disorder prediction 94 148 - -
Lele19g1113 389 Pfam WRKY DNA -binding domain 204 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele19g1113 389 ProSiteProfiles WRKY domain profile. 198 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele19g1113 389 SMART WRKY_cls 203 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele19g1113 389 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 59 302 IPR044810 GO:0003700
Lele19g1113 389 MobiDBLite consensus disorder prediction 94 192 - -
Lele19g1113 389 MobiDBLite consensus disorder prediction 155 177 - -
Lele19g1113 389 FunFam WRKY transcription factor 57 189 263 - -
Lele19g1113 389 SUPERFAMILY WRKY DNA-binding domain 195 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele19g1113 389 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1113 Lele-ChrLele19 7246437 7248393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1113 173 385 WRKY Transcription Factor Family AT2G47260 43.111 3.57e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele19g1113 WRKY 3.3e-26 CL0274