Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1097 ATGAGCTTTTTCTCTGAGATACCCGCCCAATCATCAATTCAATTTCAATCCACGCTTCCTGTTGAATCATTGGGTTCTCAGCTTTTAGTGGACTTCCAACGCCATCAAGTGGTAAGTTCTGGCAATTCTCTTTTGCCCAAATGCCCAAATCGTAGTGACATTCATGATGTCGTGCTTCTTGTGGTCAACACTACAGTACTGCGAGTGGATATGAATATTATTCTCTGTTTTCTGTCCATTTGTTTCTACTCTTTAGCTATCCCATTCATTAAAGCATCAGAAATAAATGTAGAATCGTATGAACTTGATAGGGTGATTACTCTTCCTGGCCAACCTTCAAGCCCCTCAGTCTCACAATTTTCAGGTCATATCACTGTCAATGAAGCTCATGGGAGGGCCCTTTTCTATTGGTTCTTCGAAGCTCAATCTGAATCATCTAAGAAGCCTCTTCTTCTCTGGCTCAATGGAGGACCTGGATGTTCTTCAATTGGGTATGGTGCAGTTGTTGAAATAGGACCTCTTACAGTCAACAAAAATGGTGAAGGACTGCATTTCAACCCTTATTCCTGGAATCAAGAGGCAAATTTGTTATTTGTGGAGTCACCAGTTGGAGTAGGTTTTTCTTACACAAACACATCTTCTGATCTCACCATATTAGAGGATAGCTTTGTGGCTGAAGATGCCTACAATTTCTTGGTAAATTGGCTGCAAAAGTTCCCACAGTTTAAATCTCAAGATTTCTTTATATCAGGAGAGAGTTATGCTGGCCACTATATCCCTCAGCTGGCAGAACTCATCTTCGATCGAAACAAAGATAGAAGCAAATACTCATTTATCAATCTTAAAGGTTTTATTGTGGGGAATCCAGAAACCGAAAATTATTATGATTCTAAAGGCCTTCTGGAATATGCATGGAGCCATGCAGTCATATCCGATCAGGAATATGACAAAGCAAAAAATGTTTGTAATTTCAAGCAATTTTATTGGTCTGAGGAATGCAATAAGGCCATGAATGTGGTCTTCCGAGATTACAGGGAGATAGATATTTACAACATTTATGCCCCATCATGTCACCTAAATAATACTTCGTCCATAGCTCAAGATGACAATAATACAGGCTCTGAATCAGTTCCTGAGGGGAAAAATGATTACAGACTGAGAAGGATGAGGCTTTTTGGAGGCTATGACCCATGTTATTCCACTTATGCAGAAGAATATTTCAATAGGATAGATGTTCAGTCATCTTTTCATGCCAATGTCAAAGAAGGAAACAAAAGTACTGTAGCATGGAAGACTTGCAATGACTCCATATTAAATACATATAACTTCACCGTTTTCTCTGTCCTTCCCATCTACACAAAACTCATCAAGGGTGGTCTCAAGGTGTGGATTTACAGTGGGGACACAGATGGCAGAATACCAGTGATAGGGACAAGATATTGCATTGAGGCTCTTGGATTGCCCCTCAAATCTAGCTGGCGAACTTGGTACCATGATAATCAGGTGGGAGGGAGGATAGTGGAGTATGAAGGGCTAACATATGTGACAGTGAGAGGAGCAGGTCATTTGGTGCCACTTAACAAGCCTAGTGAGGCTCTCTCCCTCATTCATTCTTTCCTCACTGGACAGAATCTCCCTTCTCATCCATGA 1650 0.4079 MSFFSEIPAQSSIQFQSTLPVESLGSQLLVDFQRHQVVSSGNSLLPKCPNRSDIHDVVLLVVNTTVLRVDMNIILCFLSICFYSLAIPFIKASEINVESYELDRVITLPGQPSSPSVSQFSGHITVNEAHGRALFYWFFEAQSESSKKPLLLWLNGGPGCSSIGYGAVVEIGPLTVNKNGEGLHFNPYSWNQEANLLFVESPVGVGFSYTNTSSDLTILEDSFVAEDAYNFLVNWLQKFPQFKSQDFFISGESYAGHYIPQLAELIFDRNKDRSKYSFINLKGFIVGNPETENYYDSKGLLEYAWSHAVISDQEYDKAKNVCNFKQFYWSEECNKAMNVVFRDYREIDIYNIYAPSCHLNNTSSIAQDDNNTGSESVPEGKNDYRLRRMRLFGGYDPCYSTYAEEYFNRIDVQSSFHANVKEGNKSTVAWKTCNDSILNTYNFTVFSVLPIYTKLIKGGLKVWIYSGDTDGRIPVIGTRYCIEALGLPLKSSWRTWYHDNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPSEALSLIHSFLTGQNLPSHP 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1097 549 FunFam Carboxypeptidase 99 359 - -
Lele19g1097 549 Pfam Serine carboxypeptidase 109 541 IPR001563 GO:0004185|GO:0006508
Lele19g1097 549 ProSitePatterns Serine carboxypeptidases, histidine active site. 512 529 IPR033124 GO:0004185
Lele19g1097 549 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 105 529 IPR001563 GO:0004185|GO:0006508
Lele19g1097 549 ProSitePatterns Serine carboxypeptidases, serine active site. 249 256 IPR018202 GO:0004185
Lele19g1097 549 FunFam Carboxypeptidase 448 542 - -
Lele19g1097 549 Gene3D alpha/beta hydrolase 99 359 IPR029058 -
Lele19g1097 549 Gene3D - 398 437 - -
Lele19g1097 549 FunFam Carboxypeptidase 395 545 - -
Lele19g1097 549 Gene3D - 448 542 - -
Lele19g1097 549 SUPERFAMILY alpha/beta-Hydrolases 105 545 IPR029058 -
Lele19g1097 549 PRINTS Carboxypeptidase C serine protease (S10) family signature 199 209 IPR001563 GO:0004185|GO:0006508
Lele19g1097 549 PRINTS Carboxypeptidase C serine protease (S10) family signature 512 525 IPR001563 GO:0004185|GO:0006508
Lele19g1097 549 PRINTS Carboxypeptidase C serine protease (S10) family signature 235 260 IPR001563 GO:0004185|GO:0006508
Lele19g1097 549 PRINTS Carboxypeptidase C serine protease (S10) family signature 186 198 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1097 Lele-ChrLele19 7137216 7143446 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1097 430 545 Calmodulin-binding Proteins AT2G22960 32.479 7.62e-15 71.2